Myotis daubentonii (Daubenton's bat): 132235396
Help
Entry
132235396 CDS
T10294
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60 isoform X1
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
mdt Myotis daubentonii (Daubenton's bat)
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdt03019
]
132235396
Enzymes [BR:
mdt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132235396
Messenger RNA biogenesis [BR:
mdt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
132235396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN-like_DDX60
DEAD
ResIII
Helicase_C
DotZ
Motif
Other DBs
NCBI-GeneID:
132235396
NCBI-ProteinID:
XP_059553661
LinkDB
All DBs
Position
5:43681957..43789737
Genome browser
AA seq
1714 aa
AA seq
DB search
MGLEKYRMFLEEISELILSEMPKADYSSIFNDFVESEFFLIDGDSLLVMFICEESLKQGQ
ELHFFYLVERYLVDIISKGGQFAIVFFKDAEYAYFNFPEILSLRTALILHLQHNNTIDVR
TQFSGCLSQEWKNFLEESYPYFLIVADEGLNDLQTHLFNFLIIQSWSMKVNAVLSSGQAS
DVLRLYAYFMLSRHRQQTFFKQNEKKIENAYKALIKQLEGCRDLAFEPIFGNLRWNNMIE
EASEIIYLLKQLWPEGSDIRRVLCVTSCSLTLRMYHDFLENRKKTTSAQETNIQQVKGDC
LSLQWMEDLCKLHCLSVVFLLHLPLSQRACTRVITSDWIEDIQTFLKMRKWCEYFILNNR
SIFEFWNLNLIHLCDLSDELLLKNIAFYYENENVQGLHLNLGNDIMKDYEYLWNAVSMLV
RKFDVGKPFPLRTTQLNFLKKDPVPIKDTSKEKMPNLGFIPMSSEMVDKFVGDILKDLPF
LKRDDPIVTSLVKHKAFDELVHWHSHRPLSDDYDRAKSAFNGNPRDPYYLKSLQKYQVFQ
RFYGNSLESVSPKLIVTQDVKPKKNFSKPKTKKANETKAEIITRENKKRLLAKEEQKEEN
KWSVLSHSIEEEMKENLNSGIQNLEDFLKSCKSNLVKYQVEIVGLTACLKAWKEHCRSQG
KGETAKDLSIAVQMMKRIHSLMEKHPDFLQEADRQLIARCLKYLGFDELASSLNPTEVAE
DGIKEKKKNKYSIGIGPVRFQLQYMGHYLLRDERKDPDPRVHDFIPDTWQRELLDVVDNN
ESAVIVAPTSSGKTYASYYCMEKVLKESDEGVVVYVAPTKALVNQVAATVQNRYMKNLPN
GETLCGIFTREYRHDALNCQVLVTVPACLEILLLAPHRQRWVKRIRYVIFDEVHCLGGEI
GAEVWEHLLVMIRCPFLALSATISNPEHLTEWLQSIKWYWKQADNIIEKNTASKRNAGYR
ANFYKDHFQMKQSYKVRLVLYGERYNDLEKHICSVKHNDICFDHFHPCAALTTEHIERYG
FPSDLMLSPRETIQLYDTMFEFWKSWPRAQELCPENFIHFKNKIVIKKMDARKYEESLKA
ELTNWIKNGNVEEAKQVLRNLSPKPVSSSENMIQMFPLLVEKLRKMEKLPALIFLFKLGA
VEKCARSVCTFLEEKQERERPPNADKEAYDMANKLRKIKKSIEKQKIIDEKSQKKPRKMD
KSLIHEAEHNSLLKILEKNLEIPPEFTYADRKTVDSELLQMVFDRVKFLRKGAELKALAE
RGIGYHHRCLFAKEKQLVEILFRKGFIRVVTATGTLALGINMPCKSVVFAQNSIYLDALN
YRQMSGRAGRRGQDLLGDVYFFDIPFPKIQKLIKSNVPELRGQFPFSITLVLRLMVLASR
GDDPEDAQAKVLSVLKHSLLSFKQPKTMEMLKLYFLFSLQFLVKEGYLDQEGNPMGFAGL
VSHLHYHEPSNLVFVSFLVSGLFHNLCQPTHKGSKYFSQDVMEKLVLVLANLFGRRYIPA
KFQESTVKFHQSKVFLEDLPEDFNAALHEYNMQITKDFASFLLIVSKLADMKQEYQLPLS
KINFTGKECEDSQLVSHLMSCKEGRVAISPFVCLSGNSDGDLLQPATPSHVILRTIGISH
AQAPVLWPHRFDSQGRRMPLNAYALDFYKHGSLTGLVQDNRMNEGDAYELLKDFSLTLQS
ISVSLRELCENEDDNVVLAFEQLSKTFSEKFNKV
NT seq
5145 nt
NT seq
+upstream
nt +downstream
nt
atgggtttagaaaaatataggatgtttttagaggaaatttcagagttaattttgagtgaa
atgccaaaagctgactattccagtatattcaatgattttgttgaatctgaattttttctc
attgatggagattcattgcttgtcatgttcatatgtgaggaatcattaaagcagggacag
gagctccatttcttctatttggttgaacgctaccttgtggatattattagtaaaggagga
caatttgccatagttttcttcaaggatgctgagtatgcatatttcaacttccctgaaatt
ctttctttgagaactgctttaattcttcatcttcagcataataacaccattgatgttcga
acacaattttctggatgcttatcacaagaatggaaaaattttttggaagagagttaccca
tatttcctgatagttgcagatgaaggcttgaacgatctacaaacacatcttttcaacttt
ttaatcattcagtcttggtcaatgaaggtcaatgctgtgctttcctcaggacaagcatct
gacgttcttcgactttatgcgtactttatgctaagcaggcacagacaacaaacgtttttc
aagcagaatgaaaagaagattgagaatgcttataaagccctgattaaacaattagaagga
tgtagggatttggcatttgaacctatttttggaaatttaagatggaacaatatgattgaa
gaggcatctgaaataatttatctgcttaagcaactctggccagaaggatctgacattcgg
cgtgttctttgtgttacttcatgctccttgactctgagaatgtaccatgactttttagaa
aacagaaagaagaccacctctgctcaggaaactaacatccaacaggtgaaaggtgattgc
ttaagcctgcaatggatggaagatctgtgtaagctgcattgtctcagtgtggtttttcta
ctccatttacctctttctcaaagagcttgtaccagagtcatcacttccgattggattgag
gacattcagactttcctaaaaatgagaaagtggtgtgaatatttcatcctaaataataga
agcatttttgaattttggaatctgaatttaattcacctttgtgacttaagtgatgagctt
ttgttgaagaatattgctttttactatgaaaatgaaaatgttcaaggcctacatttgaat
ttgggaaatgacattatgaaagattatgaatatctctggaatgctgtatcaatgttggtc
agaaagtttgatgttggaaagccatttcctctgagaacaacacaacttaattttcttaaa
aaggacccagtaccaatcaaagacacctccaaggaaaagatgcccaatttgggttttatt
ccaatgtcatctgagatggttgataaatttgttggagacattttgaaagatttgcctttc
ttaaagagggatgatccgattgtaacttcactggtgaaacataaggcatttgatgaactt
gtacattggcattctcacagaccccttagtgatgattatgatagggcaaagtccgctttt
aatggaaaccctagagatccttattaccttaaatctctgcaaaagtatcaagtttttcag
cgattttatggaaattcattagaatcagtctctcccaaactcattgtaactcaagatgtc
aagccaaagaagaatttcagtaaacccaagaccaaaaaggcaaatgagacaaaggctgaa
ataattactagagagaataaaaagagattacttgccaaggaagaacaaaaagaagagaat
aagtggagtgttctgtcacactccattgaggaggaaatgaaagagaatttaaactctgga
atacagaacctggaagattttttgaaatcatgtaaaagtaacttggtgaaatatcaagtt
gaaatagtagggttaactgcctgcttgaaagcatggaaagaacattgtagaagccaagga
aaaggtgaaactgcaaaagatttaagtatagctgttcaaatgatgaaaaggatccactcc
ttgatggaaaaacacccagattttttgcaagaggcagatcggcaactcatagccagatgc
cttaagtatttaggatttgatgagttggcaagttctttaaatccaactgaggttgcagaa
gatggcataaaggagaagaaaaagaataaatattcaattggcattgggcctgttcggttt
caactacaatatatgggccattatttgctacgagatgagagaaaagatccagatcccaga
gttcatgattttattcctgacacatggcagagagagctccttgatgttgtggataataat
gaatcagctgtgattgttgctccaacgtcctcaggcaaaacctatgcttcctactactgc
atggagaaagtgctaaaggagagcgatgaaggggtggttgtgtatgtcgcaccaacaaag
gcccttgttaatcaagtggcagcaactgttcagaatcgttacatgaaaaatctgcctaat
ggtgaaactctctgtggtatttttacaagggaatatcgtcatgatgccctaaactgtcag
gtacttgttacagtgcctgcctgccttgaaattctgctgttagctcctcatcgccaaaga
tgggtgaaaaggatcagatatgttatatttgatgaggtccattgtcttggtggagagatt
ggagcagaagtttgggaacatctccttgtcatgattcgatgtccctttctggctctttcg
gctacaataagcaaccctgaacatctcactgagtggctacaatcgataaaatggtactgg
aaacaagcagacaatataatagaaaagaacactgcttctaaaagaaatgctggctatcgt
gccaatttttacaaagaccactttcaaatgaagcagtcatataaagttagacttgtgctc
tatggagagagatacaatgatttagagaagcatatatgttcggtaaaacataatgacatt
tgctttgatcattttcacccatgtgccgcactaacaacagagcatattgaaaggtacgga
ttcccttctgatcttatgctttcgcctcgagaaaccatccagctttatgacaccatgttt
gaattctggaaaagttggcccagggcccaggagttgtgtccagagaatttcattcatttt
aagaataaaatagtcattaagaagatggatgctaggaaatatgaagagagcttaaaggca
gaattaacaaattggattaaaaatggcaatgtagaggaggccaaacaggtcctgaggaat
cttagtcccaaaccagtttctagttcagaaaacatgattcaaatgtttccacttcttgtt
gaaaagcttaggaaaatggagaagttaccagcactaatttttttattcaagttaggagct
gtagagaagtgtgctagaagtgtctgcacttttttggaggagaagcaagagagagaaagg
cctcccaacgctgataaagaagcctatgacatggctaacaaacttcgaaaaattaaaaaa
tctattgaaaaacaaaagataatagatgaaaaaagccagaagaagcccaggaaaatggat
aaaagcctaatacatgaagctgaacataacagtctactcaagattctagagaagaacctg
gaaatccctccggagttcacctatgctgacagaaagacagtggacagcgagcttttgcag
atggtgtttgatcgagtaaaattcttaaggaaaggtgcagaactgaaggctttggcagaa
aggggtataggatatcatcacagatgtttgtttgccaaagaaaaacagttagttgaaatt
ctttttaggaaaggatttattagggtagtgacagctactgggacacttgctttaggaatc
aatatgccttgtaaatctgtggtttttgctcaaaactcaatctatctggatgctttaaat
tacagacagatgtccggacgtgctggaagacgaggtcaggacctgctgggagatgtatat
ttctttgatattccgttccccaaaatacaaaaactcataaaatccaatgttcctgagctg
agagggcagtttcccttcagcataaccctggtgctgcgactcatggtcttggcttcgagg
ggagatgacccagaggacgcccaggcaaaggtgctgtcagtactaaagcattcattgctg
tccttcaaacagcccaaaaccatggagatgttaaaactttactttttattttctctgcag
ttcctggtgaaagagggctatctagatcaagaaggtaatccgatgggttttgctggactt
gtatcacatttgcattatcatgagccttctaatcttgtttttgtcagttttcttgtaagt
ggccttttccataatctctgtcagccaacccataaaggctcaaaatatttttctcaagat
gttatggaaaagctcgtgttggtgttggcaaatttgtttggaagaagatatattccagca
aagttccaagaaagtactgtcaagtttcatcaatcaaaggtgttccttgaggatctccct
gaagattttaatgctgctttacatgaatataacatgcaaattacaaaggactttgcctcc
ttcctactaattgtttccaaattggctgatatgaaacaggaatatcaacttccattgtca
aaaataaatttcacagggaaagaatgtgaagactcccaacttgtgtctcacttgatgagc
tgcaaggaaggaagagttgctatttctccatttgtttgtctctctgggaactctgatggt
gatttgcttcaaccagcaactccaagccatgtcattctgcgcacaattggtatcagtcat
gctcaggctcctgtgctttggccgcacagatttgatagccaaggaagaagaatgccactt
aatgcttatgcacttgatttctataagcatggttccttgacaggattagtccaggacaac
aggatgaatgaaggagacgcttatgagctgttgaaagatttttcactcacccttcaatct
atcagtgtttccttgcgtgaactatgtgaaaatgaagatgacaatgtggtcttagcattt
gaacaattaagcaaaaccttttctgaaaaatttaacaaagtctga
DBGET
integrated database retrieval system
