KEGG   Myotis daubentonii (Daubenton's bat): 132235989
Entry
132235989         CDS       T10294                                 
Symbol
THOC3
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
mdt  Myotis daubentonii (Daubenton's bat)
Pathway
mdt03013  Nucleocytoplasmic transport
mdt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mdt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132235989 (THOC3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    132235989 (THOC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdt03019]
    132235989 (THOC3)
   03041 Spliceosome [BR:mdt03041]
    132235989 (THOC3)
Messenger RNA biogenesis [BR:mdt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     132235989 (THOC3)
Spliceosome [BR:mdt03041]
 Complex C
  Other components
   EJC/TREX
    132235989 (THOC3)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    132235989 (THOC3)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_EML_2 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st ANAPC4_WD40 WDR55 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR3_2nd Beta-prop_Aladin Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st WD40_Gbeta Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd eIF2A Beta-prop_IFT140_1st Beta-prop_EML Beta-prop_Vps41 DSE1_N Beta-prop_WDR36-Utp21_1st WD40_RFWD3 Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N Beta-prop_NOL10_N WD40_MABP1-WDR62_1st Beta-prop_HPS5 RMC1_N NBCH_WD40 WDR90_beta-prop_4th Tricorn_2nd Beta-prop_EIPR1 Beta-prop_ACSF4 PD40 B-prop_COPA_B_2nd TRM82_WD PAC11 Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_NUP159_NUP214 ASA1 Beta-prop_WDR41 Beta-prop_Nup120_160 Beta-prop_NWD2_C Peptidase_S9_N Cytochrom_D1 PROPPIN DPPIV_N TP_0598_N Beta-prop_ELP1_1st Beta-prop_WDR11_1st WD_LRWD1 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 132235989
NCBI-ProteinID: XP_059555226
LinkDB
Position
5:complement(107936760..107948326)
AA seq 351 aa
MAVPAAAMGPSALGQSGPGSMAHWCSVSSGPTRYVLGMQELFRGHSKTREFPAHSAKVHS
VAWSCDGRRLASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASG
DKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQ
FKFEVNEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPTGKYFA
TGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDK
LWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLFGLPNDS
NT seq 1056 nt   +upstreamnt  +downstreamnt
atggcggtacccgcggcggccatggggccctcggcgctgggccagagcgggcccggctcc
atggcccactggtgctccgtgagcagcggcccgacgcgctacgtgctgggcatgcaggag
ctgttccggggccacagcaagacgcgcgagttcccggcgcacagcgcgaaggtgcactcg
gtggcctggagctgcgacgggcggcgtctggcctctgggtccttcgacaagacggctagc
gtcttcctgctggagaaggaccggttggtcaaagaaaacaattaccgcggacacggcgac
agcgtggaccagctgtgttggcatccaagtaaccctgacctgttcgtcacagcgtctgga
gacaaaaccattcgcatctgggatgtgaggactaccaagtgcatcgctactgtgaacact
aaaggggagaacattaatatatgttggagtcccgatgggcagaccatagccgtaggcaac
aaggatgatgtcgtgacctttattgatgccaagacacatcgttcgaaagcagaggagcag
ttcaagtttgaggtcaatgaaatctcctggaacaatgacaataacatgttcttcctgaca
aatggcaatggttgcatcaacatcctcagctacccagagctgaagccggtgcagtccatc
aatgcgcacccttctaactgcatctgcatcaagttcgaccccacggggaagtactttgcc
acaggaagtgcggatgctttggtcagcctctgggatgtggatgagttagtgtgtgttcgg
tgcttttccaggctggattggcctgtgaggaccctcagtttcagccacgatgggaaaatg
ctggcttcagcatcagaagatcattttattgacattgctgaagtagagacaggagacaag
ctatgggaggtgcagtgtgagtccccgaccttcactgtggcttggcaccccaaaaggcct
ctgctggcatttgcctgtgatgacaaagatggcaaatatgacagcagtcgggaagcaggg
actgtgaagctgtttgggcttcccaatgactcctga

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