Myotis daubentonii (Daubenton's bat): 132238037
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Entry
132238037 CDS
T10294
Symbol
COL3A1
Name
(RefSeq) collagen alpha-1(III) chain
KO
K19720
collagen type III alpha
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt04611
Platelet activation
mdt04820
Cytoskeleton in muscle cells
mdt04926
Relaxin signaling pathway
mdt04933
AGE-RAGE signaling pathway in diabetic complications
mdt04974
Protein digestion and absorption
mdt05146
Amoebiasis
mdt05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
132238037 (COL3A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
132238037 (COL3A1)
09152 Endocrine system
04926 Relaxin signaling pathway
132238037 (COL3A1)
09154 Digestive system
04974 Protein digestion and absorption
132238037 (COL3A1)
09160 Human Diseases
09174 Infectious disease: parasitic
05146 Amoebiasis
132238037 (COL3A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
132238037 (COL3A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
132238037 (COL3A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mdt00536
]
132238037 (COL3A1)
Glycosaminoglycan binding proteins [BR:
mdt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
132238037 (COL3A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
132238037
NCBI-ProteinID:
XP_059558516
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All DBs
Position
7:2143079..2180915
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AA seq
1467 aa
AA seq
DB search
MTSFVRKGTWLLLTLLLPALVLAQQLPEVTDGGCTHFGQSYADRDVWKPEPCQICVCDSG
SVLCDDIICDDQELDCPNPEIPFGECCAVCPQPPTTPTRPPNGHGPQGPKGDPGPPGIPG
RNGDPGLPGQPGTPGSPGAPGICESCTTGGQNYSPQFESYDVKSGVGGAGVGGYPGPAGP
PGPPGPPGASGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPVGPAGKDGESGRPGR
TGERGLPGPPGMKGPAGMPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGP
MGPRGSPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGS
PGSNGSPGQRGEPGPQGHAGAPGPAGPPGNNGSPGGKGEMGPAGIPGAPGLSGARGPPGP
PGTNGVPGQRGAAGEPGKNGNKGEPGARGERGEAGIPGLPGTKGEDGKPGSPGEPGSNGS
PGAPGERGAPGFRGAAGANGLPGEKGPAGERGGPGPAGPRGAPGESGRDGAPGPPGMRGV
PGSPGGPGGDGKPGPAGPPGARGSPGSPGGAGPRGQPGVMGFPGPKGNDGAPGKNGERGG
PGGPGAPGPAGKDGASGAPGPPGPQGAAGDKGEAGPPGPQGLPGLQGASGPPGESGKPGE
AGPKGEAGAPGAPGGKGDSGAPGERGPPGAVGPPGPRGGSGAPGSDGGKGPPGPPGPPGL
AGSPGLQGMPGERGGPGGAGPKGDKGEPGTAGADGAPGKDGPRGPTGPIGPPGPAGMPGD
KGEGGTPGPPGAAGPPGGPGERGESGPPGPAGFPGAPGQNGEPGGKGERGLPGERGEGGP
PGAAGPPGGAGPPGPTGPQGVKGDRGSPGGPGAAGFPGGRGPPGPPGNNGNPGPPGVSGA
PGKDGPPGPPGSNGSPGNPGISGPKGDAGPPGEKGSPGSQGPPGAPGPLGLAGITGARGL
AGPQGMPGPRGSPGPQGIKGEAGKPGPSGHNGERGPPGPQGLPGLAGTAGEPGRDGNPGS
DGLPGRDGTPGTKGDRGENGSPGAPGSPGHPGPPGPVGPAGKSGDRGEPGPSGPTGAPGP
AGVRGPAGPQGPRGDKGETGERGSNGIKGHRGFPGNPGAPGSPGPAGHQGAVGSPGPAGP
RGPVGPSGPAGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCG
GGAVAISGGGGEKAGGFAPYYGDEPLDFKINTEEIMTSLKSVSGQVENLISPDGSRKNPA
RNCRDLKFCHPELQSGEYWVDPNQGCKMDAIKVFCNMETGETCISASPQSVPRKRWWADS
GAEKKHVWFGETMDGGFQFSYGNPELPEDVLDVQLAFLRLLSSRASQNITYHCKNSIAYM
DHASGNVKKALRLMGSNEGEFKAEGNSKFTYTVLEDGCTKHTGEWGRTVFEYRTRKAVRL
PIVDFAPYDVGGPDQEFGVDIGPVCFL
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcttcgtgcggaaggggacctggctgctcctcactctgctgcttcccgcgctg
gtcctggcccagcagctcccggaagttactgatggaggatgcacccatttcggccagtcc
tatgcagacagagatgtctggaagccagaaccatgccaaatatgcgtctgcgactcagga
tctgttctctgcgatgacataatctgtgatgaccaggaattggactgccccaacccggag
atcccgttcggagaatgctgtgcggtgtgccctcagcctccgacaactcccacacgccct
ccaaatggccatggacctcagggcccgaagggagatcccggccctcctggtattcctggg
agaaatggcgaccctggtcttcccgggcagcccgggacccctggttctcccggcgcccct
ggaatctgtgaatcatgcactactggtggccagaactattctccccagtttgagtcctac
gatgtcaagtccggagtaggaggagcgggtgtcggaggctatcccgggccagctggtccc
ccaggtcctcccggccctcctggtgcatctggtcatcctggctcccctggttctccggga
taccaaggcccccctggtgaacctgggcaggctggtccttcgggccctccaggacctcct
ggtgctattggtccagttggccccgctggaaaagatggggaatctggaagacctggacgg
accggagagcgaggactgcccggccctccgggtatgaaaggcccggctggcatgcccgga
ttccctggaatgaaaggacacagaggcttcgatggacggaatggcgaaaagggtgaaacg
ggtgctcctggactaaagggtgaaaacggccttcctggtgaaaacggagcgccggggccc
atgggtccccgagggtctcctggggagaggggccggccgggactccctggagccgctggg
gctcgaggtaatgatggtgctcgaggaagtgatggacaaccgggcccgcccggccccccc
ggaacggcaggattccccggttcccccggtgctaagggcgaagtcggacctgcaggctct
cctggctcaaacggctcccccggacagagaggagaacctggacctcagggacacgctggt
gctccgggccctgcgggccctcctgggaacaatgggagtccgggcggcaaaggtgaaatg
ggtcccgccggcattcctggggctcctggcctgtccggagcccggggtcccccaggcccg
cccggtaccaatggggttcccggccagcgaggtgctgccggcgaacccggtaagaacggt
aacaaaggagagcccggagcacgcggggagcgtggggaagctggtatccccgggctgccg
ggcactaagggtgaagacggcaagcctggttcgcctggagagcctggttccaacggatcc
ccgggagccccgggagagaggggcgcgcccggattccgaggagctgctggagccaacggc
cttccgggagaaaagggtcccgccggggagcgcggcggccccggccccgcagggccccga
ggagcccccggagaatctggccgagacggtgcccccggacccccaggaatgaggggggtg
cccgggagcccgggaggaccaggcggcgacgggaagccggggccggccgggccaccagga
gcgagaggctcccccggttctccaggcggagctggcccgcggggtcagcctggcgtcatg
ggcttccctggccctaaaggcaacgatggggctcctggcaaaaacggagagcgaggtggc
cccggaggtcctggcgccccgggtccggctggcaaggacggtgcaagtggagctccgggc
cccccgggaccgcagggggcagctggtgacaaaggagaggcaggaccccctggccctcag
ggattgccgggcctccaaggagccagcgggccccccggggagagcgggaagcctggtgag
gcaggcccgaagggcgaggccggtgcgcccggagcgccaggaggcaagggagactctgga
gcccctggcgagcgtgggcctcctggagcggtaggtccccccggaccgagaggtggatcg
ggcgcccccggttccgacggaggcaagggcccgcccggcccccctgggccgcccggtctt
gctggcagccctggcctgcaagggatgcccggagagagagggggccctggaggcgccggc
ccgaagggtgacaagggggagccaggcaccgcgggtgctgacggggctcctggcaaagac
ggtccccggggtcctactggtcccatcggtcctcctggccccgctggtatgcctggagat
aagggcgaaggtggaacccctggacccccgggcgcagctggtcctcctggaggccctggc
gagagaggtgaaagcggacccccaggccccgccggcttccctggtgctcccggacaaaac
ggcgagcctggcgggaaaggagagagaggccttcctggagagagaggcgagggcgggccc
cccggggccgcaggaccccccgggggagctggacctccgggccccactggtccccaaggt
gtcaaaggtgatcgcggcagccctggcggtccgggcgctgctggcttccccggcggccgc
ggaccccccggccctcctggcaacaacggtaacccaggccccccaggcgtcagtggtgct
ccaggcaaggacggccccccgggcccccccgggagcaatggcagccccggcaaccccggg
atttccggacctaaaggtgacgctggcccgcccggcgagaagggctcccccgggtcccag
ggccccccgggcgccccaggcccactcggactcgcagggatcaccggcgcgcgggggctg
gcggggccccagggcatgcccgggcccaggggcagtcctggcccgcaaggcattaagggc
gaagcagggaagccgggacccagcggtcacaacggagagcgcgggccgcctgggccccag
ggcctgcccggcctggcggggacggcgggcgaacccgggcgcgatggaaaccctggatcc
gatgggctcccgggccgtgatggaactcctgggaccaagggagatcgtggtgaaaacggc
tctccaggcgcccctggctccccgggacaccccggcccgcccggtcccgtgggtccagca
ggaaagagtggtgacagaggagaacctggcccttctggccctactggtgccccaggtcct
gctggtgtccgcggtcctgctggtccccaaggcccgcgtggcgacaaaggtgaaacaggt
gaacgtggttctaacggcatcaaaggacatcgaggattccccggcaaccccggcgccccc
ggctctccaggccctgctggtcaccaaggggcagtcgggagcccagggcccgccggcccc
agaggacccgttggacctagtgggcccgccggcaaagacgggaccagtggacatccaggg
cccatcggaccaccagggcctcgagggaacagaggtgaaagaggatccgagggctccccc
ggccaccccggccagccaggcccgcctggaccccccggcgcgccggggccctgctgtggc
gggggcgcagtggccatctccggcggcggaggggagaaggcaggagggtttgccccctat
tacggagatgaaccactggatttcaagatcaacaccgaggagattatgacttccctcaag
tcagtcagcggacaggtggaaaacctcatcagccctgacgggtctcgcaaaaacccggcc
cggaactgccgagacctgaagttctgccacccggagctccagagcggggaatattgggtt
gaccctaaccaaggctgcaagatggacgccattaaagtgttctgcaacatggagacgggg
gagacctgcatcagcgccagtccccagagcgtcccccgcaagcgctggtgggcagactcc
ggcgccgagaagaagcacgtctggttcggggaaaccatggatgggggcttccagttcagc
tacggcaaccctgagctccctgaggacgtcctggatgtgcagctcgccttcctccgcctg
ctctccagccgggcctcccagaacatcacctaccactgcaagaacagcatcgcgtacatg
gaccacgccagcgggaacgtgaagaaagccctgaggctgatgggctccaacgaaggcgaa
ttcaaggctgaggggaacagcaagttcacatacacagtcctggaggatggctgcacgaaa
cacaccggcgagtggggcagaacggtcttcgaatatcggacacgcaaggcggtgagactc
cctattgtggacttcgcgccctatgatgttggcggtcccgatcaagagttcggtgtggac
attggccctgtttgctttctataa
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