Myotis daubentonii (Daubenton's bat): 132238198
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Entry
132238198 CDS
T10294
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132238198 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdt03019
]
132238198 (BARD1)
04121 Ubiquitin system [BR:
mdt04121
]
132238198 (BARD1)
03036 Chromosome and associated proteins [BR:
mdt03036
]
132238198 (BARD1)
03400 DNA repair and recombination proteins [BR:
mdt03400
]
132238198 (BARD1)
Messenger RNA biogenesis [BR:
mdt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
132238198 (BARD1)
Ubiquitin system [BR:
mdt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
132238198 (BARD1)
Chromosome and associated proteins [BR:
mdt03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
132238198 (BARD1)
DNA repair and recombination proteins [BR:
mdt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
132238198 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_2
Ank_4
Ank_5
Ank_3
zf-RING_5
BRCT
ANK_LRRK2
zf-C3HC4
zf-C3HC4_2
Ank_KRIT1
zf-rbx1
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
132238198
NCBI-ProteinID:
XP_059559029
LinkDB
All DBs
Position
7:complement(19371766..19430198)
Genome browser
AA seq
676 aa
AA seq
DB search
MPGNRDLRVRSGNQPRPAPAMEPAAGGAWAHSRAALNRLETLLRCSRCTNILKEPVCLGR
CEHIFCSNCVSDCLGAECPVCNTPAWIQDVKINRQLDSMIQLCSKLHNLLHENELSDLKE
ETCRKNLFNHAESKKNSIKMWFSPRSKKVRYVVSKVSVQTQPQVINDENAQQASTYEYSS
ASPPVDSSARAKKASTRSGKKQKKKTFTKINRMWNLEAGKKDGQLDSKEKFKEKLVSVSV
QPSVNASPQRNGEIDLLASGSVAEDECFGNLTEVSLPLAERIESPEIESRNEVMTPEKNL
CENDLPSKNGKRGRHRRLSSPVSKRCRNSIASTSENLVKQTGLSANIPLPGSSLQPSTKL
KVGDRVRRKSRTILDESMSSSLSTLTSTPPSTLNSTNYGRMLSSPSAMKLTPGNHTTVKR
NHKGETLLHIASIKGDIPSVAYLLQNGSDPNVKDHAGWTPLHEACSHGHLQVVELLLQHK
ALVNTPGYQNDSPLHDAAKNGHVDIVELLLSHGASRNAVNIFGLRPVDYADSKTMKSLLL
PPEKNESSSTRHCSVMHAAQRRDGPLVLIGSGLSSEQQKLLSELAAILKAKKCAEFDSTV
THVIISGDTVQSTLKCMLGILNGCWILNFEWVKACLQSKQCEQEEKYEIPQGPQRSRLNR
EQLVFSFCYYFHCSYI
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgccggggaaccgggacctgagggtccgctccgggaaccagccgcgtcccgcgcccgcc
atggagccggcggctggcggcgcctgggcccacagccgcgccgcgctcaaccggctggag
acgctgctgcgctgctcgcgctgcactaatattctgaaagagcctgtgtgtttaggaaga
tgtgagcacatattctgtagtaactgtgtaagtgactgccttggagccgaatgtccagtg
tgtaataccccagcctggatacaagacgtgaagataaacaggcagttggacagcatgatc
cagctttgcagtaagcttcataatttgctgcatgagaacgagctttcagatttaaaagaa
gaaacatgcaggaaaaatttatttaatcatgcagaaagtaagaagaattcaataaaaatg
tggtttagtcctcgaagtaagaaggtcagatatgttgtaagtaaagtttcagtacaaact
cagcctcaagtgataaatgatgaaaatgctcagcaggcctcgacgtatgagtattcttct
gcgagtcctccagtagactcttctgcgagggctaaaaaggcttctacaagatctggaaaa
aaacagaagaagaaaactttcactaaaatcaaccgaatgtggaatttagaggcaggcaaa
aaagatggtcaacttgactccaaagagaaatttaaggaaaagctggtatctgtctctgtc
caaccatctgttaatgccagtcctcagagaaatggtgaaatagatttattagcaagcggc
tctgtggcagaagatgaatgttttggaaacttaaccgaagtctctttaccattggctgag
cgaatagagtctccagaaattgagagcaggaatgaagtcatgactcctgagaagaatctc
tgtgaaaatgatcttccgtctaagaatggaaaacgtgggcgtcacaggagactttccagt
cccgtttctaagagatgtagaaacagcattgccagcaccagtgaaaatttggttaagcaa
acagggctctcagcaaacatcccattgcctggctcttctttgcagccttcaaccaaactt
aaagttggagacagagtaaggaggaaaagcagaactatattagatgaatccatgagctcc
tcactctctacactgactagcacaccaccctctacactgaatagtacaaattacggccga
atgctgtccagcccctcagcaatgaaactgacacccggtaaccatacgactgtgaaaaga
aatcataagggcgagactttgctccatattgcttcaattaagggcgacataccttctgtt
gcatacctcttacaaaacggaagcgacccaaacgttaaagaccatgctggctggacacca
ttgcatgaagcctgtagtcatgggcacctgcaggtagtggaattgttactccagcacaag
gctttggtgaacacccctgggtatcagaacgactcaccactccacgatgcggctaagaat
gggcatgtggacatagtcgaactgttactgtcccatggagcgtccaggaatgctgttaac
atatttggtctgcgacctgtggattatgcagacagtaagactatgaaatcgctattgctg
ccgccagagaagaatgaatcatcatccactcgccattgctcagtaatgcatgctgctcag
cgtagggatggacctcttgtactcataggcagtgggctttcttcagaacaacagaaattg
ctcagtgagcttgcagcgattcttaaggctaaaaaatgtgctgagtttgacagtacagtg
actcatgtcattatttctggtgatacagttcaaagtaccctgaaatgtatgcttgggatt
ctcaatggatgctggatcctgaactttgaatgggtgaaggcatgtctgcaaagcaaacaa
tgcgaacaggaagagaaatatgagattcctcaaggaccacagagaagcaggctcaaccga
gaacagctggtattttccttttgctactactttcattgttcttatatctga
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