Myotis daubentonii (Daubenton's bat): 132240126
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Entry
132240126 CDS
T10294
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
132240126 (COL20A1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
YjeF_N
Fn3_Dep-1_2nd
Tafi-CsgC
Motif
Other DBs
NCBI-GeneID:
132240126
NCBI-ProteinID:
XP_059563469
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All DBs
Position
8:complement(3075688..3097232)
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AA seq
1329 aa
AA seq
DB search
MDRGLSGLSFPRLSTMGAHVHPHLGVCLCLWLGVTLGLGQEQANGRLKLAVLPEDQLQIK
WTESEGGGLGYLVQVKPMAGDVEQEVMLTTKTPKATVGGLSPSKGYTLQIFELTGSGNVL
LAQREFVIEDLRSHYASRSSWRPLGAALEPTPSHMESLDPDPRVILAPSQDPPTLGGSRW
GEGFPGKDQRSPRGPGGKAPAQLSPERPSRPRTSVRNREAPAGLQFHCMPPTPADMIFLV
DGSWSIGHSHFQQVKDFLASIIEPFEIGPDKVQVGLTQYSGDPQTEWDLNTFSTKEEVLA
AVHSLLYRGGNTFTGLALTHVLEQNLRPAAGPRPEAAKVVILVTDGKSQDDACAAGRILK
SLDVDIFAVGVKNADEAELRLLASPPLDITVHHVQDFPQLSTLAGLLSRLVCQQVQGRSP
RPGPEVATRGSRKSLYASCLWLPQGLFTPWPVSLICDAFSCGAPLPVPLPPPQALALATV
TPRTIHLTWQPSAGATQYLVRYSLASPKGEEEDREVQVGQPEVLLGSLEPGRDYDIWVQS
LQGAQASEARGIHARTPPLAPPTPLIFSDVSHDSARVSWEGTLRPVQLFRVSYLSSKGSH
SGQIEAPGNATSVTLGPLSSSTTYTVRVTRLYPGGGSSTTTGRLTTRKVPSPSQLSVTEL
PGGAVRLAWAAAAASGVLVYQIKWTPLGDGKAHEISVPGSLCTAVLPGLGGPLEHEITIL
ASYRDGAHSDPVSFHYSPRVSRSPPSNLTLASESPNSLRVSWTPPTGHVLYYRLTYMLAS
GSGPEKSVSVPGPRSHAMLPDLLAATKYRVLASAVYGAGESVAVTATGQTAACPALHPDG
SLAGFDLMAAFGLVEREYASIRGVAMDPSAFGATRTFTLFRDAQLTRRASDIHPAALPPE
HTVVFLLRLLPETPREAFALWQMTAEDFRPVLGVLLDAGRKSLTYFSHDPRAALREVTFD
LPEVRRIFFGSFHKVHVAVGHSKVQLYVDCRKVAERPIGEAGSPPATGFITLGRLAKARG
PRSSSAVLQLQMLQIVCSDTWAEEDRCCELPASKNGETCPAFPSACTCSSQIPGPPGPQG
PPGLPGRNGASGQQGFPGPRGEPGPPGQTGPRGPGGHQGSPGTQGRTVQGPVGPPGVKGE
KGDHGLPGLQGDPGHQGDPGEAGLQGPKGMRGLEGTTGLPGPPGPRGYPGTAGARGTSGE
RGPPGTVGPTGLPGPKGERGEKGEPQSWAAIYQLVSQACESIIQTHVRRLDSFPHKSARL
PMPIWEAPGLPGEGGNGGSRPEDRGAPAALAQVGSPQPQGSKIPGSLGGAGEPGLGRGGT
GGRSPCCLE
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atggacagagggctgagcggcctctccttccccaggctgagcaccatgggtgcccacgtg
cacccccacttaggggtctgcctctgcctgtggctgggtgtcaccctgggacttggccag
gaacaagcaaatggccgcctgaagctagctgtgctgcccgaggaccagctgcagatcaag
tggacggagtcggaggggggtggccttggctacctggtgcaggtgaagcccatggcaggg
gacgtggagcaggaggtgatgctgaccaccaagactcccaaggccacagtgggaggcctg
agcccctccaaggggtacaccttgcagatctttgagctcaccggctcagggaatgtcctg
ctggctcagagggagtttgtgatcgaggatttgaggagtcactatgcgagcagaagcagc
tggaggcccctgggggcagctctggagcccacaccttcccacatggagagcctggaccct
gacccccgagtcatcttggctccaagccaagacccgcccactctgggtgggtccaggtgg
ggtgagggatttcctggcaaggatcaacgctcccccagaggccccggggggaaggcccct
gctcagctcagcccagaaaggcccagccgccccaggacgtctgtgagaaacagagaggcg
ccagctggcctccagttccattgcatgcctcctacacccgccgacatgatcttcctagtg
gacgggtcttggagtattggccacagtcacttccagcaggtcaaagacttcctggccagc
atcatcgagccctttgaaattgggccggataaagtccaagtaggcctgactcagtacagt
ggagacccccagaccgagtgggacctgaacaccttcagcaccaaggaggaggtgctggca
gccgtgcacagcctcctctacagagggggaaacacattcacaggcctggccctgacccac
gtgctggagcagaacctgaggcctgcagctggtccccgcccagaggcagccaaggtggtg
attctcgtgacggacggcaagtcccaggacgatgcctgtgctgctggccgcatcctcaag
agcctggatgtcgacatctttgctgtgggtgtgaagaatgctgatgaggctgagctgagg
ctcctggcgtccccgccactggacatcaccgtccaccacgtgcaggacttcccccagctc
agcacactggccggcctgctcagccgcctagtttgccagcaggtccagggcaggagccca
cgtcctggtccagaagtggccaccagggggagcaggaagagtctctatgccagctgcctc
tggcttccccaggggctctttaccccttggcccgtgtccctgatctgtgatgctttctcc
tgtggtgccccccttccagtgcctctgcctccgccccaggcactcgccctggccacagtg
acgcccagaaccatccacctcacctggcagccctcggcgggggccacccaatacctggtg
cggtactcgctggcctcccctaagggcgaggaggaggacagagaggtgcaggttgggcag
ccggaggtgctgctgggtagcctggagccaggcagggactatgacatctgggtgcagagc
ctgcaaggtgcacaggccagtgaagcccggggcatccacgccaggacccctcccctggct
ccccccacacccctgatcttctcagacgtgagccatgactcggcccgtgtgtcctgggaa
ggcaccctgaggccggtgcagctgttcagggtcagctacttgtccagcaagggcagccac
tcggggcagatagaggctcctggcaatgccacctcggtcaccctgggccccctctcctcc
tccactacctacactgtccgcgtcacccgcctctaccctgggggcggctcctccaccacg
accggccgcctgaccacacggaaagtccccagcccgagccagctgtccgtgacagagctc
cctgggggtgcggtccggctggcgtgggcggccgcagcggcgtccggggtgctggtctac
cagatcaagtggacgcctctgggggacgggaaggcccatgagatctccgtcccggggagc
ctgtgcacggccgtcctgcccggcctgggggggcccttggagcacgagatcaccatcctg
gcctcctacagggacggggcccacagcgaccccgtgtccttccactacagcccccgagtc
agccggagcccaccctccaacctgaccctggcttctgagtcaccaaacagcctacgggtc
agctggacgccccccactggccacgtcctctactaccggctcacgtacatgctggcctca
ggctccggaccagagaaatcagtctctgttccaggacccaggagccatgcgatgctccct
gacctgctggcagccaccaagtacagggtcctggcctcagcagtgtacggagcaggcgag
agtgtggcagtgactgccacaggccaaacggcagcctgcccagccctccacccagatggc
tcccttgcaggctttgacctcatggcggcctttgggcttgtggagagggagtacgcctcc
atccgcggggtggccatggacccctccgcgtttggcgcgaccaggaccttcaccctcttc
agggacgctcagctgacacgccgagccagcgacatccacccggccgccctcccgcctgag
cacacagtcgtcttcctcctgcgcctcctccccgaaacgccccgcgaggcctttgcgctg
tggcagatgacagccgaggacttccgacctgtcctcggggtcctgctggatgcaggcaga
aagtccctgacctacttcagccacgaccccagagcggccttgcgggaggtgacctttgac
ctgcctgaagtgaggaggatattcttcgggagcttccacaaggtgcacgtggccgtggga
cactccaaggtccagctctacgtggactgtaggaaggtggccgagaggcccatcggggag
gcgggcagccctcccgccaccggcttcatcacgctggggaggctggccaaggcccggggc
ccccggagcagctcggctgtgctgcagctccagatgctgcagatcgtgtgcagtgacacc
tgggcggaggaggacaggtgctgcgagctccctgcgtcgaagaacggagagacctgccct
gccttcccttccgcctgcacctgctcctcgcagatacctgggcccccgggaccccaaggg
cctccaggcctccctggcaggaatggagcctcaggacagcagggcttccccgggcccagg
ggagagcccgggccacctggacagactggaccccgaggtcctggaggtcatcaggggtca
ccagggacccagggtcgaactgtccagggacctgtgggtccaccaggggtcaaaggagag
aagggggaccatggactcccgggcctgcagggcgaccccggccaccagggcgaccccggg
gaggctggcctccagggtccgaagggcatgagaggcctggagggcaccactggcctgccc
ggaccccctggacctaggggctacccgggcacggcgggagccagggggaccagtggggag
cgaggacccccagggactgtggggcccacgggtctgcccgggcccaagggggagcgagga
gagaagggcgagccacagtcctgggctgccatctaccagcttgtgagccaggcctgcgag
tccatcatccagacgcatgtgcggaggttggactccttcccccacaagagtgcccggctc
cccatgcccatctgggaggcccctgggctccctggagaagggggaaatggtggctcccgc
cctgaggacagaggtgcacccgcagccctggctcaggtgggcagccctcagccacagggg
agcaagattccaggatccttgggaggggcaggggaacctggcctggggagaggaggtact
ggaggccgttctccctgctgcctggagtga
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