Myotis daubentonii (Daubenton's bat): 132240179
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Entry
132240179 CDS
T10294
Name
(RefSeq) LOW QUALITY PROTEIN: spliceosome RNA helicase DDX39B-like
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt03013
Nucleocytoplasmic transport
mdt03015
mRNA surveillance pathway
mdt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132240179
09122 Translation
03013 Nucleocytoplasmic transport
132240179
03015 mRNA surveillance pathway
132240179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdt03019
]
132240179
03041 Spliceosome [BR:
mdt03041
]
132240179
Enzymes [BR:
mdt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132240179
Messenger RNA biogenesis [BR:
mdt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
132240179
Spliceosome [BR:
mdt03041
]
Complex C
Other components
EJC/TREX
132240179
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
132240179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
132240179
NCBI-ProteinID:
XP_059563486
LinkDB
All DBs
Position
8:complement(34616944..34619497)
Genome browser
AA seq
481 aa
AA seq
DB search
MGCLIQQLNDVFKDLGRLLRSAIFLLVPLSAPTFLLCFHLICVNPSRDPPSSLAGPAVAE
NDVDNELLDYEDDEVETAAGGDGAEAPTKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDC
GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVPGQVSVLVMCHTQ
ELAFQISKEYERFSKYMPNVKVVVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNK
SLNLKHIKHFILDECDKMLEQLDMRRRDVQEIFRMTSHEKQVMMFSATLSKEIRPVCRKF
MQDPMEIFVDDETRLTLHGLQQYYVTLKDNEKSRKCSDLLDVLEFNQVVIFVKSVQRCIA
PAXLQVEQNFPAIAIHRGTPREERLSRYQXRRILVATNLFGRGMDIEGVNTAFNYDVPED
SDTCLHLVARAGQFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYIEQT
R
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgggctgtttgattcagcagctcaatgatgtcttcaaggacttgggccgccttctccgc
tccgccatctttctgttggttccactctcagcccccactttcctcctctgttttcactta
atctgcgtgaacccgtcccgagaccctccctcctccctggccggcccagctgtggcggag
aacgatgtggacaacgagctcttggactatgaagatgacgaggtggagaccgcagccggg
ggagacggggctgaggcccccaccaagaaggatgtgaagggctcctacgtctccatccat
agctctggcttccgcgacttcctcctcaagccagagctgctccgagccattgttgactgt
ggctttgagcatccatcagaagttcagcatgagtgcatccctcaggccattctgggaatg
gacgtcttatgccaggccaagtcgggcatgggaaagacggcagtgtttgtgctggccaca
ctgcagcagctggagccagttcctgggcaggtgtctgtgctggtgatgtgtcacacccag
gagctggcttttcagatcagcaaggagtatgagcgcttctctaagtacatgcccaatgtc
aaggtggtggtgttttttggaggtctgtccatcaagaaggatgaagaggtgctgaagaag
aactgcccgcatatcgtcgtggggacccctggccgcatcctagccttagctcgaaataag
agcctcaacctcaaacacattaaacactttatcttggatgaatgcgataagatgcttgaa
caactcgacatgcgtcgtcgggatgtccaggaaatttttcgcatgacctcccacgagaag
caagtcatgatgttcagtgccaccctgagcaaagagatccgccccgtctgccgcaagttc
atgcaggacccaatggagatcttcgtggatgatgagacgaggctgacgctgcacgggttg
cagcagtactacgtgacactgaaggacaacgagaagagccggaagtgctctgaccttttg
gatgtccttgagttcaaccaggtggtgatctttgtgaagtctgtgcagcgctgcatcgcc
ccggccncgctccaggtggagcagaacttcccagccatcgccatccaccgcgggacgccc
cgggaggagaggctttctcggtatcagncacgacgaattcttgtggctaccaacctgttt
ggccgaggcatggacatcgagggggtgaacactgcctttaattacgacgtgcctgaggac
tccgacacctgcctgcatctggtggctagagcaggccagtttggtaccaagggtttggcc
atcacgtttgtgtcagatgagaatgatgccaagatcctcaatgatgtgcaggatcgcttt
gaggtcaatattagtgagctgcctgatgagatagacatctcctcctacattgaacagaca
cgatag
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integrated database retrieval system
