Myotis daubentonii (Daubenton's bat): 132240725
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Entry
132240725 CDS
T10294
Symbol
PCF11
Name
(RefSeq) pre-mRNA cleavage complex 2 protein Pcf11 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt03015
mRNA surveillance pathway
Brite
Transcription machinery [BR:
mdt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
132240725 (PCF11)
Messenger RNA biogenesis [BR:
mdt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
132240725 (PCF11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132240725
NCBI-ProteinID:
XP_059564285
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Position
9:complement(33913803..33940507)
Genome browser
AA seq
1685 aa
AA seq
DB search
MSEPTPAEAGTAGAREDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEA
QTAKAPSSEKLPVMYLMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRS
TWDEIFPLKKLYALDVRVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEEPSTPGTVV
TSPSISTPPIVPDIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSV
QQETSNLGPGSAPSKLHVSQIPPMAVKAPHQIPLQPEKSRAGPSLQIQDLKGTNRDPRLN
RMSQHSSHGKDQSHRKEFLMNTLNQSDIKTSKTIPSEKLNSSKQEKSKSGEKITKKELDQ
LDSKSKSKSKSPSPLKNKFSHTKDLKNQESECPRVSDMSKRDPRLKKHLQDKTDSKDDDI
KEKRKTSEKKDKDEHMKSSEHRLVGSRNKIVNGIVQKQDVITEDSEKQGTKPGRSSTRKR
SRSRSPKSRSPIIHSPKRRDRRSPKRRQRSMSPTSTAKAGKIRQSGCKQSHMEDFMPPSR
EERNAKRSTKQDVRDPRRIKKTEEERPQETTSQHSTKSGTEPKENVENWSSSKSNKRWKS
GWEENKSLQQGDDHSKSPHLRHRESWSSTKGILSPRAPKQQHRLSVDANLQIPKELTLAS
KRELLQKTSERLASGEITQDEFLVVVHQIRQLFQYQEGKHRCNVRDSPSEENKGGLKKKP
LLSDAELTYYEHKAKLKRTQVQHSFPRLDLLDPDIFDYPLTDALLSGIECEPSKSKHASR
NSGAQFDRKEQFSERARRLSPISGSRSYAENLSPHEGRRRHDEQVSAKGVREEQRSPFND
RFPLKRPRYEDADKPFVDSPASRFAGLDTNQRLTALAEDRPLFDGPSRPSVTRDGPTKMI
FEGPNKLSPRIDGPPAPGSLRFDGSPGQMGGAGPLRFEGPQGQLGGGCPLRFEGPPGPVG
TPLRFEGPIGQAGGGGFRFEGSPGLRFEGSAGGLRFEGPGGQPVGGLRFEGHRGQPVGGL
RFEGPHGQPVGGLRFDNPRGQPVSGHRFEGGHGPSGAAIRFDGPHGQPAGGIRFEGPLLQ
QGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFE
GPVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTGQPG
PQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGARFDNHPSQRLESVSFNQ
TGPYNEPPGNAFNTPSQGLQFQRHEQIFDSPQGPNFNGPHGPGNQSFSNPLSRTSGHYFD
EKNLQSSQFGNFGNLPAPITVGNIQASQQVLTGVAQPVPFGQGQQFLPVHPQNPGAFVQN
PSGALPKAYPDNHLSQVDVNELFSKLLKTGILKLSQPDSATTQVNEGAAQPPTEEEEDQN
EDQDVPDLTSFTIEELKQRYDSVINRLYTGIQCYSCGMRFTTSQTDVYADHLDWHYRQNR
TEKDVSRKVTHRRWYYSLTDWIEFEEIADLEERAKSQFFEKVHEEVVLKTQEAAKEKEFQ
SVPAGPAGAVESCEICQEQFEQYWDEEEEEWHLKNAIRVDGKIYHPSCYEDYQNTSSFDC
TPSPSKTPVENPLNIMLNIVKNELQEPCESPKVKEEQIDTPPACTEESIATPTEIKTEND
TVESV
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagccgacgccggccgaggccggtaccgcgggggcccgggaggacgcctgtcgg
gattatcagtcatccctcgaagacctgaccttcaatagcaaaccgcacatcaatatgctg
accattctagccgaggagaacctgcccttcgccaaggagatcgtctctctcatcgaggcc
caaaccgccaaggctccttcctcagagaagcttcctgttatgtaccttatggattctatc
gtgaaaaacgttggacgagagtatctcactgcctttactaaaaatctagttgcaacattt
atttgtgtgtttgaaaaggtggatgaaaatactagaaaaagtttatttaaattacgttcc
acatgggatgagatattcccattgaagaaactttatgccctggatgtcagagtcaattca
ttagatcctgcttggcctattaaacctctaccccccaatgtgaatacatctagcatccat
gtgaatcctaaatttttaaataaatcgcctgaagagccttcaacacctggcacagtggtc
acttcccctagcatctccactcctccaattgttcctgatatacaaaagaatcttacccaa
gaacaactaataaggcagcagttacttgcaaaacaaaaacagttattagaacttcagcag
aaaaagctggagcttgaactagagcaagctaaagcacaactggcagtttctcttagtgtt
cagcaggagacatccaacttaggccctggatctgcaccatccaaattacatgtttcacaa
attccccctatggcagttaaagctccccatcagattcctttgcaacctgaaaaaagccgt
gcaggtccatccttacaaattcaggacttgaaaggaacaaaccgggatccccgtcttaat
aggatgagtcagcattcttctcatggaaaagatcaaagtcacagaaaagaatttctaatg
aatacgttaaaccaatctgatattaagacaagtaaaactataccttctgaaaaactaaat
tcatccaaacaagaaaaaagtaaatcaggtgaaaaaataaccaagaaagaacttgaccag
ttagattctaaatctaaatctaaatctaaatcaccatcacctttgaaaaacaaattctct
cacacaaaagacttgaaaaatcaagaatctgaatgcccaagggtgtctgacatgagtaag
agagatccaagattaaaaaaacatcttcaagataagactgatagcaaagatgatgatata
aaagagaagagaaaaacttcagaaaaaaaagataaagatgagcatatgaaatcatctgaa
catagactggttggaagtcgaaataaaatcgttaatggcattgtacaaaaacaagatgta
ataacggaagactcagaaaagcagggaacaaaaccggggagatcaagtactagaaagcga
tcaagatcgagatcacccaagtctcggtcaccaattatacattctcctaagagaagagat
aggcggtcacccaaacgaaggcaaaggagtatgtctccaacctcgacagccaaagctgga
aagattcgccaatctggatgtaagcagtcacatatggaagacttcatgccaccttccagg
gaagaaagaaatgctaagagaagtactaaacaggatgttcgagatccaaggcgaataaaa
aagactgaagaggaacgaccgcaagaaactacaagtcagcattctacaaagtcaggcact
gaaccaaaggagaatgtagaaaattggtcaagttccaagtctaacaaaagatggaaatct
ggttgggaagaaaataaaagcttacaacaaggtgacgaccatagtaaatctcctcatcta
aggcatagggaaagctggtcaagcactaaaggaattttgtcacctcgagccccaaagcaa
cagcatcgattaagtgtagatgccaatcttcagattcctaaagagttaactcttgcaagc
aaaagagaattacttcaaaagacgagtgaacgtttagcatctggtgaaattacacaggat
gagttccttgttgttgtgcatcaaattcgacagctatttcagtatcaagaaggtaaacat
agatgcaatgtacgcgatagtccttcagaagaaaataaaggtggattaaaaaagaaacct
ctcttatctgatgctgaattaacctactatgaacataaagcaaaactgaaaaggacacag
gttcagcattcatttccaagacttgatctcttagatcctgatatttttgactaccctttg
actgatgccttgttgtctggaatagaatgtgagccatccaaaagtaaacatgcaagtagg
aatagtggagcacagtttgacagaaaagaacaatttagtgaaagagcaagacgtctttct
cctatatctgggagtcgttcttatgctgagaatctttcaccccatgagggccggagaaga
catgacgagcaagtctctgctaaaggtgtgcgagaagagcagaggtcaccattcaatgat
cgttttccacttaagcgacctagatatgaagatgcagataaaccatttgtagatagccca
gcatcacgattcgccggccttgatacaaatcagcgacttacagcgttagctgaagacaga
ccgttatttgatggacctagtaggccatcagtaacaagagatggcccaaccaagatgatt
tttgaaggacctaataaattaagccctagaattgatggacctcctgcaccaggttctctt
cgatttgatgggtcacctggacagatggggggagctggtcctttgagatttgaaggacca
caaggtcagctaggaggcgggtgtcctttgagatttgaaggtcctccaggaccagtaggg
acacctttgcgttttgaagggccaattggtcaagcaggcggaggtggttttcggtttgaa
ggttcccctggtctgaggtttgagggatctgcaggtggtctaagatttgaaggaccaggg
ggccagcctgtgggtgggctcaggtttgagggacatcggggtcaacctgtgggaggtctg
aggtttgagggacctcatggtcagcctgtgggtggacttagatttgataatccccgaggt
cagcctgtaagtggacatagatttgaggggggtcatggtccatcaggagctgcaattagg
tttgatggacctcatggtcagccagcaggtgggatcagatttgagggccctttgctacag
cagggagttggaatgaggtttgagggcccccatggtcagtcagtagctggtctgaggttt
gaaggacaacataatcaacttggtggaaaccttaggtttgagggtccacatggtcagcca
ggggttgggatcaggtttgagggacccttagtccaacaaggaggtggaatgaggtttgag
ggtcctgttccaggaggtggactgagaattgaagggcctctgggtcaaggtggtccaaga
tttgaaggttgtcatgctttaaggtttgatgggcagccaggtcagccatcactcttacca
agatttgatggattacatggtcaaccaggtcctagatttgaaagaactggtcaaccaggc
ccacagagatttgatggaccacctggacagcaggttcaaccaagatttgatggtgttcct
caaagatttgatggtccacaacaccagcaagcatcaaggtttgatattccccttggtctt
caaggcgcacgatttgacaatcatccttcacaaaggcttgaatccgtttctttcaatcag
actggtccatataatgagccgcctggcaatgcttttaataccccatcccaaggactgcaa
ttccaaagacacgaacaaatatttgattcacctcaaggaccaaattttaatggaccacat
ggccctgggaaccagagtttctcaaatcctcttagcagaacttctggacactattttgat
gaaaagaatcttcaaagttctcaatttggaaactttggcaatttacctgctccaataaca
gtaggaaacattcaggcatctcaacaggttctgactggtgttgctcaaccagtaccattt
ggccagggacaacaatttttaccagttcatccacaaaatcctggagcatttgttcagaat
ccttcaggagcccttcctaaggcatatcctgataatcacctcagtcaggtggatgtaaat
gaattattttcaaaactgctaaaaacaggaattctcaaattgtcccagcctgattcagct
acaacacaagtcaatgaaggtgctgctcagcctcccactgaagaggaggaagatcagaat
gaagatcaagacgttcccgatcttaccagtttcacaattgaagagttaaaacaacgttat
gatagtgttataaatcgactgtacactggtattcagtgttactcttgtggaatgaggttt
acaacgtcacagacagatgtttatgcagatcacttggactggcattatcggcaaaatcga
actgaaaaagacgttagcagaaaagtcactcatagacgttggtactacagtttaacagac
tggatagaatttgaggaaatagctgatttggaagaacgtgcaaagagccagttttttgaa
aaggtgcatgaagaagttgtgctcaaaactcaggaagctgctaaagaaaaggagttccaa
agtgtaccggcagggccagctggagcagtggagagttgtgaaatctgtcaagaacaattt
gaacaatactgggatgaagaagaggaggagtggcatttaaagaatgccattagagtggat
ggaaagatttatcatccatcgtgttatgaagattatcaaaatacatcttcatttgattgt
acaccatctcccagcaagacaccagttgaaaaccctttgaacattatgttgaacattgtc
aaaaatgaattgcaggaaccctgtgaaagtcccaaagttaaggaagaacaaattgatacc
ccaccagcttgtacagaggagagcatagcaacacccactgaaattaaaactgaaaatgat
acagttgagtcagtttaa
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