Myotis daubentonii (Daubenton's bat): 132241306
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Entry
132241306 CDS
T10294
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2 isoform X1
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
mdt Myotis daubentonii (Daubenton's bat)
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mdt03009
]
132241306 (IGHMBP2)
03012 Translation factors [BR:
mdt03012
]
132241306 (IGHMBP2)
Enzymes [BR:
mdt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
132241306 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
132241306 (IGHMBP2)
Ribosome biogenesis [BR:
mdt03009
]
Eukaryotic type
Other ribosome biogenesis factors
132241306 (IGHMBP2)
Translation factors [BR:
mdt03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
132241306 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
Viral_helicase1
zf-AN1
AAA_16
DEAD
nSTAND3
ResIII
AAA_22
UvrD-helicase
IstB_IS21
AAA_25
Helicase_RecD
Zot
ATPase
PhoH
SLFN-g3_helicase
VWA_2
Herpes_ori_bp
AAA
ABC_tran
Flavi_DEAD
UvrD_C_2
AAA_33
AAA_7
Motif
Other DBs
NCBI-GeneID:
132241306
NCBI-ProteinID:
XP_059565803
LinkDB
All DBs
Position
9:complement(79067425..79083788)
Genome browser
AA seq
1009 aa
AA seq
DB search
MASAAVETFVAKQLDLLELERDAEVEERRSWQENVSLKELQRRGVCLLRLQASSQRTGLY
GQLLVTFEPPRCASAGVLPSNSFSSGDIVGLNDEGGQLATGVLTRITQRSVTVAFDQSCD
SQLSFDQQNSYRLLKLANDVTYKRLKKALIALKKYHAGPAFSLIEVLFGDAAPSPAGDTG
APTFYNAALDASQQEAVSFALAQKELAIIHGPPGTGKTTTVVEFILQAVKQGCKVLCCAP
SNIAVDNLVERLARSGRRALRLGHPARLLESVQQHSLDAVLARSDGAQIVADIRRDIDQV
SVKIRKTQDKREKSTFQNEIRLLRKELKAREEAAMLESLRAADVVLATNTGASPDGPLKL
LPDGYFDVVVIDECAQALEASCWVPLLKARKCVLAGDHKQLPPTIVSPKAALAGLSLSLM
ERLAQGCCAGAVRTLTVQYRMHRAIMQWASEALYRGQLTAHPSVAEHLLRDLPGVAATEE
TGLPLLLVDTAGCGLSELEEEEDQSKGNPGEVRLVSLHVQALVDAGVPASDIAVITPYNL
QVDLLRQSLAHRHPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAITR
ARRHVAIVCDSRTVSSHAFLKTLVDYFTEHGEVRTAFEYLDDIVPENYSYESSQGHGQAG
AKPQGSAGSARKPGSRRPEGAREARATARLVQKAPPGKPFGSEAQSQPSLNGGSPGRVGS
RDSADHFRALIAEFVASEQVQLEFPASLNSHDRMRVHQIAEEHGLKHDSSGEGKHRFITV
SKRAPPAPQATAAPSAPPVPPVPPVPAGTDGEAPLHPEPPSPVQTEPPGREPSSVDLRAV
HLERLQRERARQEQRAKEGPRATGPGLRKLPEKKKKKDAKVALFSPGPAALDLPSTEDFD
ALVSAAMKADNTCGLAKCRASVVTLGQLCPHCSHRYCLSHCLPEIHGCGERARAHARQRI
SREGVLYAGSGTKDRSLDPAKRAQLQRSLDKKLGELSSQRRSKRREKEM
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggcggccgtggaaaccttcgtggccaagcagttggacctgctggagctggag
agggacgcggaggtggaggagcgcaggtcctggcaggaaaacgtctctctgaaggaactc
cagcgccgcggcgtctgtctgctgaggctgcaggcctccagccagcggaccgggctgtac
gggcagctgctggtcaccttcgagcccccgagatgcgcgtctgcgggagtgcttcccagc
aacagcttttcctccggtgatattgtgggtctgaatgatgaaggaggtcagctggccact
ggggtgctgacccggatcacccagagatcggtcacagtggcctttgaccagtcctgtgat
tcccagttgagcttcgaccaacagaattcctaccgactgttaaaacttgccaatgacgtc
acttacaagcgcctgaagaaagccctgatcgccctgaagaagtaccacgccggccccgcg
ttctcgctcatagaggtcctcttcggggacgcagcccccagtcctgccggcgacacaggg
gcgccaaccttctacaacgccgccctggacgcctcccagcaggaagcggtttcgtttgcg
ctggcccagaaagaactggccatcatccacgggcctcctggcaccgggaagaccaccact
gtggtggagttcatcctccaggctgtgaagcagggctgcaaggttctgtgctgcgcgccc
tccaacatcgccgtggacaacctggtggagcgcctggcgcgaagcgggcggcgggcgctg
cgcctcgggcaccctgcccggctcctggagtccgtccagcagcactcgctggacgcggtg
ttggcgcgcagcgacggcgcccagatcgtggccgacatccggagggacatcgaccaggtc
tccgtgaaaattagaaagacccaggataagagagagaaaagtacttttcaaaatgaaatc
aggctgctaaggaaggagctgaaggcgagggaagaggccgcgatgctggaaagcctccgg
gcggccgacgtggtcctggccacgaacacaggcgcttctcccgacgggcccctgaagctg
ctgcccgacggctacttcgacgtggtggtcatcgacgagtgcgcccaggccctggaagcc
agctgctgggtccccctgctgaaggccaggaagtgcgtcctggccggggaccacaagcag
ctgccccccaccatcgtctctcccaaagctgcgctggcgggactgtcgctgagcctgatg
gagcgcctggcccaggggtgctgcgcgggggcagtgcggacgctgacggtgcagtaccgc
atgcaccgggccatcatgcagtgggcctcggaggccctgtaccgcgggcagctcacagca
cacccttccgtggcagagcacctcctgcgggacctcccgggagtggctgccacagaggag
acaggcctccccctgctgctcgtggacacggccggctgcgggctgtccgagctggaggag
gaggaggaccagtccaaagggaaccccggggaggtgcgtctcgtcagcttgcacgtccag
gctctggtggacgccggcgtcccggcgagcgacatcgccgtcatcacgccatacaacctc
caggtggacctgctccgacagagccttgctcacaggcaccctgagcttgaaatcaagtcg
gtcgacggcttccaaggccgagagaaggaggcggtggtgctgtccttcgtcagatccaac
aggaaaggtgaagtgggtttccttgccgaggaccggcggatcaacgtggccatcacccgc
gctcggcgccacgtggccatcgtctgcgactcgcgcactgtcagcagccacgccttcctg
aagacgctggtggattacttcacggagcacggggaggtgcgcacggcctttgagtatctt
gatgacattgtccctgaaaactattcctacgagagttcccagggccacggccaggccggc
gcgaagccccaaggctcagccgggtccgccaggaagcctggaagccggcggcccgaggga
gctcgggaggccagagcgaccgccaggctggtccagaaggcgccgcccgggaagcccttc
ggctctgaggcccagtctcagcccagcctcaacggaggcagcccagggcgggtggggagc
agggacagtgcggaccacttccgggccctgatcgccgagtttgtggccagtgagcaagtg
cagctggagtttcctgcttccctgaactcacacgacaggatgcgcgtccaccagatagcg
gaagagcacgggctgaagcatgacagctccggggaagggaagcacaggttcataaccgtg
agcaagagggccccgccggccccgcaggccacagcggccccatcggctccaccagtccca
cctgtcccccccgtcccggcagggactgatggcgaagcccctctccatcccgagcccccc
agccccgtgcagacggagccccccgggcgagagccgagcagcgtggacctgagggctgtg
cacctggagcgactgcagagggagagggccaggcaggagcagcgagccaaggagggccca
cgggccacgggcccggggctgcggaagttaccagaaaagaaaaagaagaaagatgcaaaa
gtggcgctgttctccccaggacccgcggccctggatctgccctccacggaggacttcgac
gccctggtctcggccgccatgaaggctgataacacctgtggcctcgccaagtgccgggcc
agcgtcgtgactctgggccagctctgcccacactgcagccaccgctactgcctcagccac
tgcctgcccgagatccatggctgtggggagagggcccgtgcccacgcccggcagagaatc
agccgggagggcgtgctgtacgccggcagtgggaccaaggaccggtccctggaccccgcc
aagagggcccagctgcagaggagcctggataagaagctgggcgagctgagcagccagagg
aggagcaaaaggagggagaaggagatgtga
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