Myotis daubentonii (Daubenton's bat): 132242592
Help
Entry
132242592 CDS
T10294
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt03013
Nucleocytoplasmic transport
mdt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132242592 (UPF2)
03015 mRNA surveillance pathway
132242592 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdt03019
]
132242592 (UPF2)
Messenger RNA biogenesis [BR:
mdt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
132242592 (UPF2)
mRNA cycle factors
P-body specific factors
132242592 (UPF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
132242592
NCBI-ProteinID:
XP_059567376
LinkDB
All DBs
Position
1:95030869..95155226
Genome browser
AA seq
1297 aa
AA seq
DB search
MEESKRIKEKKGKEEVTEKIVLGNIMPAERKKPASMEEKESLLNNKEKDCGERRPVSSRE
KPKDEIKLPAKKEVIKVPEDKKKKLEEDKRKKEDKERKKKEEEKVKAEEELKKKEEEEKK
KHEEEERKKQEEQAKRQQEEEAAQLKEKEESLQLHQEAWERHQLRKELRGKNQNAPDNRP
EENFFSRLDSSLKKNTAFVKKLKTITEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKI
SDVNCAVHLCSLFHQRYVDFAPSLLQVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVG
IFTDKEGLSLIYEQLKNIINADRESHTHVSVVISFCRHCGDDIAGLIPRKVKSAAEKFNL
TFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRH
KQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEG
GIWEDEDARNFYENLIDLKAFVPAILFKDNEKSCQNKESNKDDSKAEAKEPKDNKEVSNP
DDLELELENLEINDDTLELEGADEAEDLTKKLLDEQEQEDEETSTGSHLKLIVDAFLQQL
PNCVNRELIDKAAMDFCMNMNTKANRKKLVRALFIVPRQRLDLLPFYARLVATLHPCMSD
VAEDLCSMLRGDFRFHVRKKDQINIETKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDF
SHHHIEMACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYC
NPPPAEKTVKKKRPPLQEYIRKLLYKDLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMIN
IWNVKYNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFL
GELYNYRMVESAVIFRTLYSFTSFGVNPDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDR
GSSKRKLDCFLVYFQRYVWWKKSLEVWTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEE
SIRQVQDLEREFLIKLGLVNDKDSKDSMTEGENLEEDEEEEEGGAETEEQSGNESEVNEP
EEEEGSDNDEEEGEEEEEENTDYLTDSNKENETDEENTEVMIKGGGLKHVPCVEDEDFIQ
ALDKMMLENLQQRSGESVKVHQLDVAIPLHLKSQLRKGPPLGGGEGEAESADTMPFVMLT
RKGNKQQFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSL
AQRPAPANTNRERRPRYQHPKGAPNADLIFKTGGRRR
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaagtaagagaataaaagagaaaaaggggaaggaagaggtgacagaaaagatt
gtcctgggtaacataatgccagctgagcgtaaaaagccggcaagtatggaagaaaaagaa
tctttgctaaacaacaaggaaaaagattgtggtgaaaggcggccagtgagcagcagggag
aaaccaaaagacgagatcaagctccctgccaagaaagaggttattaaggtccctgaagat
aaaaagaagaaactggaagaagataaaagaaaaaaagaagacaaggaacgcaagaaaaaa
gaagaagaaaaggtaaaggcagaagaggaattaaagaaaaaagaggaagaagaaaaaaag
aaacatgaagaggaagagagaaagaagcaggaagagcaggcaaaacgacagcaagaagaa
gaagctgcccagttgaaagagaaagaggaatctcttcagcttcatcaggaagcctgggaa
cgacatcagttaagaaaggaacttcgtggcaaaaaccaaaatgctccagacaaccgacca
gaggaaaatttctttagccgactagactcaagtttgaagaaaaatacggcttttgtcaaa
aaactaaaaactattacggaacaacagagagactccttgtcccatgattttaatggccta
aatttaagcaaatacattgcagaagctgtagcttctattgtggaagcaaagctaaaaata
tctgatgtgaattgtgctgtgcacttatgctctttgtttcaccagcgctatgtcgacttt
gctccatcacttctgcaggtttggaaaaaacattttgaagcaaggaaagaagagaaaaca
cctaacattaccaaattaagaactgatttacgttttattgcagaattgacaatagttggg
attttcactgacaaagaaggtctttctttaatctatgaacagcttaaaaatattattaat
gctgatcgggaatcacatactcatgtttctgtggtgattagtttttgtcgacattgtgga
gatgatattgctggacttataccaaggaaagtaaagagtgctgcagagaagtttaatttg
acttttcctcctagtgagataattagtccagagaaacaacaacctttccagaatctttta
aaagaatactttacatctttgaccaaacatctgaaaagggaccacagggagctacagaat
actgagagacaaaacaggcgtattctacattctaaaggggagctaagtgaagatagacat
aaacagtatgaggaatttgctatgtcttatcagaagctgctggcaaattctcaatcctta
gcagatcttttggatgaaaatatgccagatcttcctcaagacaaaccaacaccagaagag
catggacctggaattgatatatttacacctggtaaacctggagaatatgacttggaaggt
ggtatatgggaagatgaagatgctcggaatttttatgagaacctcattgatttaaaagct
tttgttccagccatcttgtttaaagataatgaaaaaagttgtcagaataaagagtccaac
aaagatgattctaaagcagaggcaaaagaacctaaagataacaaggaggtatcaaatcct
gatgatttggaacttgagttggagaatctagaaattaatgatgacaccttggagttagag
ggtgcagatgaagctgaagatcttacaaagaaacttcttgatgagcaagaacaagaggat
gaagaaaccagcactggatctcatctgaagctcatagtagatgcttttctccagcaattg
cccaactgtgtgaaccgagagctgatagacaaggcagcaatggatttttgcatgaacatg
aacacaaaagcaaataggaagaagttggtacgggcactctttatagttcccaggcaaagg
ttggatttgctaccattttatgcaagattggttgctacattgcatccctgcatgtctgat
gtagcagaggatctttgttccatgctgaggggggatttcagatttcatgtacgaaaaaag
gaccagatcaatattgaaacaaagaacaaaactgttcgttttatcggagaactaactaaa
tttaagatgttcacaaaaaatgatacactgcattgtttaaagatgcttctatcagacttt
tcccatcaccatattgaaatggcatgtaccctattggaaacatgtggaagatttcttttc
agatctccagaatctcacttgaggaccagtgtacttttggaacaaatgatgagaaagaaa
caagcaatgcatcttgatgcaagatatgtcacaatggtagagaatgcatattactactgc
aacccacctccagccgaaaaaacagtgaaaaagaaacgtcctcctctccaggaatatatc
cggaaacttttgtacaaggatctttccaaggtcaccactgagaaggttttgagacagatg
cgaaagttgccctggcaggaccaagaagtgaaagattatgttatttgttgtatgataaac
atctggaatgtgaaatataatagtattcattgtgtggcaaacctcttagcaggactagtg
ctctaccaagaggatgttggaatccatgttgtggatggagttttagaagatattcgatta
ggaatggaggttaatcaacctaaattcaatcagagacgtatcagcagtgccaagttttta
ggggaactttataattaccgcatggtggaatcagctgttatttttagaactctttattct
tttacttcatttggtgttaaccctgatggctctccaagttcattggaccctcctgagcac
cttttcagaattagactagtgtgcactattttggatacttgtggccagtactttgacaga
ggttccagtaaacgaaaacttgattgcttccttgtatatttccagcgttatgtttggtgg
aagaaaagtttggaggtttggacaaaagatcatccattccctattgacatagattacatg
atcagtgatacactagaactgctgagaccaaagatcaagctttgtaattctctagaagaa
tccatcaggcaggtacaagacttggaacgagaattcttaataaaactgggcctagtaaat
gataaagattccaaagattctatgacagaaggagaaaatcttgaagaggatgaagaagaa
gaagaaggaggagctgaaacagaagaacaatctggaaatgaaagtgaagtaaatgaacca
gaagaagaggagggttctgataatgatgaggaggaaggagaggaagaagaggaagagaat
acagattatcttacagattcaaataaggagaatgaaactgatgaagaaaataccgaggtg
atgatcaaaggaggtggacttaagcatgtaccttgtgtagaagatgaggacttcattcaa
gctctggataaaatgatgttagaaaatcttcagcaacgaagtggcgaatctgttaaagtg
caccaacttgatgttgctattcccttgcatctcaaaagtcagctgaggaaagggccccca
cttggtggtggtgaaggagaggcagagtctgcagacacaatgccatttgtcatgttaact
agaaaaggcaataaacaacagtttaagatccttaatgtacccatgtcttcccaacttgct
gcaaatcactggaaccagcaacaggcagaacaagaagaaaggatgagaatgaaaaagctc
acactagatatcaatgaacgacaagaacaagaagattatcaagaaatgctgcagtctctt
gcccagcgcccagctccagcaaacaccaatcgtgagcggaggccccgttaccaacatcca
aagggagcgcctaatgcggatctaatctttaagactggtgggaggagacgttga
DBGET
integrated database retrieval system
