Myotis daubentonii (Daubenton's bat): 132242681
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Entry
132242681 CDS
T10294
Symbol
LSM8
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated isoform X1
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt03018
RNA degradation
mdt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132242681 (LSM8)
09123 Folding, sorting and degradation
03018 RNA degradation
132242681 (LSM8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdt03019
]
132242681 (LSM8)
03041 Spliceosome [BR:
mdt03041
]
132242681 (LSM8)
Messenger RNA biogenesis [BR:
mdt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132242681 (LSM8)
mRNA degradation factors
5'-3' decay
Lsm complex
132242681 (LSM8)
Spliceosome [BR:
mdt03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
132242681 (LSM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
132242681
NCBI-ProteinID:
XP_059567624
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All DBs
Position
10:14454409..14463418
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AA seq
112 aa
AA seq
DB search
MQTTSLPGSKVSGRIPCEVLSLTQVPGTVAVITSDGRMIVGTLKGFDQTINLILDESHER
VFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVAH
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccacttccttaccaggttctaaggtttcaggtcgcattccctgcgaagtgctt
tccttgactcaggtaccaggaactgttgctgtgattacttcggatgggaggatgatagtg
ggaacactgaaaggttttgaccagaccattaatttgattttggatgaaagccatgaacga
gtgttcagctcttcacagggagtggaacaagtggtactaggcttgtacatcgtaagaggt
gacaacgttgcagtcattggagaaattgatgaagaaacagattcggcgctggatttgggg
aatattcgagcagaacctctgaactcagtagcacactga
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