Mycolicibacterium duvalii: MDUV_02490
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Entry
MDUV_02490 CDS
T06492
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mdu
Mycolicibacterium duvalii
Pathway
mdu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MDUV_02490 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdu03019
]
MDUV_02490 (deaD)
03009 Ribosome biogenesis [BR:
mdu03009
]
MDUV_02490 (deaD)
Enzymes [BR:
mdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MDUV_02490 (deaD)
Messenger RNA biogenesis [BR:
mdu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MDUV_02490 (deaD)
Ribosome biogenesis [BR:
mdu03009
]
Prokaryotic type
rRNA helicases
MDUV_02490 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
DbpA
ResIII
CMS1
UvrA_inter
HEM4
Flavi_DEAD
DEDD_Tnp_IS110
Motif
Other DBs
NCBI-ProteinID:
BBX15389
UniProt:
A0A7I7JVR3
LinkDB
All DBs
Position
235533..237224
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AA seq
563 aa
AA seq
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MSPSDPAPDSADAPDDLSFADLQIHPAVLQAVNDVGYESPSPIQAATIPAMLEGSDVVGL
AQTGTGKTAAFAIPLLSKIDTDSRNTQALVLAPTRELALQVAEAFSRYGAHLRVNVLPVY
GGSSYGPQLAGLKRGAQIVVGTPGRVIDHLEKGSLDLSHLDYLVLDEADEMLQMGFAEDV
ERILADTPEYKQVALFSATMPPAIKKITAKYLHDPVEVTVKAKTQTAENITQRYFQVSYP
RKMDALTRLLETEQGDAMIVFVRTKQATEEVAEKLRARGFAAAAINGDIPQAVRERTISQ
LKDGTIDILVATDVAARGLDVERISHVVNFDIPHDPESYVHRIGRTGRAGRSGTALLFVT
PRERHLLGAIERVTRQKLVESELPSVEDVNEKRVAKFRDSITDALEKPGIELFRKLVEGY
ERDHDVPMADIAAALALQSRNGEEFLMSEPPPEKKRERRDKPAREDRPPRERRSDLATYR
ISVGKRHKVAPGAIVGAIANEGGLHRSDFGHIAIKLDYSLVELPAKLPGKTLKALANTRI
QGQLINLEPDRGAKPHRGKYKSR
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgagcccctccgatccggcgcccgacagtgctgatgcacccgacgacctgagtttcgct
gacctgcagattcaccccgccgtgctgcaggcggtcaacgacgtcggctacgagtcgccg
tccccgatccaggccgcgaccatcccggccatgttggagggctccgacgtcgtcggcctg
gcgcagaccggcaccggcaaaaccgcggccttcgcgatcccgctgctgtcgaagatcgac
accgacagccgcaacacccaggcgctggtgctcgcgcccacccgcgagctggcgctgcag
gtcgccgaggcgttcagccgctacggcgcgcacctgcgcgtcaacgtgctcccggtctac
ggcggcagctcctacggtccccagctggccgggctcaagcggggcgcgcagatcgtcgtc
ggcactcccggccgggtgatcgaccacctggagaagggcagcctggacctgtcgcacctg
gactacttggtgctcgacgaggccgacgagatgctgcagatgggcttcgccgaggacgtc
gaacggatcctggccgacacccccgagtacaagcaggtcgcgctgttctcggcgaccatg
ccgccggccatcaagaagatcaccgccaagtacctgcacgacccggtcgaggtcacggtc
aaagccaagacccagaccgccgagaacatcacgcagcgctacttccaggtgtcgtatccg
cgcaagatggatgcgctgacccggctgctcgaaaccgagcagggtgacgcgatgatcgtg
ttcgtccgcaccaagcaggccaccgaggaggtcgccgagaagctgcgcgcccggggcttc
gcggcggcggcgatcaacggcgacatcccgcaggcggtccgcgaacgcaccatcagccag
ctcaaggacgggaccatcgacatcctggtggccaccgacgtggcggcgcgcggcctggac
gtcgagcgcatcagccacgtggtgaacttcgacattccgcacgaccccgagtcctacgtg
caccgcatcgggcgcaccggacgcgcgggcagatcgggcaccgcgctgctgttcgtgacg
ccgcgggaacgccacctgctcggcgccatcgagcgggtcacccggcagaagctcgtcgag
tccgagctgccgtcggtcgaagacgtcaacgagaagcgggtcgcgaagttccgcgactcg
atcaccgatgcgctggagaagcccggcatcgagctgttccgcaagctggtcgagggctac
gagcgcgaccacgacgtgccgatggccgacatcgccgccgcgctggcactgcagagccgc
aacggcgaagagttcctgatgtccgagccgccgccggagaagaagcgcgaacgccgcgac
aagcccgcccgcgaggaccggcccccgcgcgagcggcgcagtgacctggcgacctaccgc
atctcggtcggcaagcgccacaaggtggcgcccggtgccatcgtcggcgccatcgccaac
gagggcgggctgcaccgctccgacttcgggcacatcgcgatcaagctggactactcgttg
gtcgagctccccgccaaactgcccggcaagacgctgaaggcgttggcgaacacccggatt
caaggccagctgatcaacctcgagccagatcgcggcgccaaaccgcatcgcggaaagtac
aaatcgaggtga
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