Mycolicibacterium duvalii: MDUV_03230
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Entry
MDUV_03230 CDS
T06492
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mdu
Mycolicibacterium duvalii
Pathway
mdu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MDUV_03230 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdu03021
]
MDUV_03230 (rho)
03019 Messenger RNA biogenesis [BR:
mdu03019
]
MDUV_03230 (rho)
Transcription machinery [BR:
mdu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MDUV_03230 (rho)
Messenger RNA biogenesis [BR:
mdu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MDUV_03230 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
Fungal_virus_P2_C
NACHT
VWA_2
S1CSD-TOTE-2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BBX15463
UniProt:
A0A7I7JUK7
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All DBs
Position
321488..323473
Genome browser
AA seq
661 aa
AA seq
DB search
MTETDLITAGGSPAPAELPNSVTPEASAAADDSATPAPAATRRSGALTSMVLPELRALAK
ELGIDGASGMRKGELVAAIRERRGASNGAAASSAPAADAAPAPETGAADQAADATPARRE
RRAASRDQGKPAGEQTAGPEQSDAEQPGSDTAKEAGRENRTEQRGRDAQESKPDRSGDTA
DKSEKPDRSDSGSGNRPDGDQQGGQNRGRGDGNRAEGGRSDNRSDNNRADGNRSDNDDDG
EGRQGRRGRRFRDRRRRERGGGDGGGGNDRDTELREDDVVQPVAGILDVLDNYAFVRTSG
YLAGPNDVYVSMNMVRKNGLRRGDAVTGAVRVAKEGDGGGQNSRQKFNPLVRLDSVNGKP
VEEAKKRPEFNKLTPLYPNQRLRLETSGDKLTTRVIDLIMPIGKGQRALIVSPPKAGKTT
IMQDIANAITRNNPECHLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSDHTQAAELA
IERAKRLVEQGKDVVVLLDSITRLGRAYNNASPASGRILSGGVDSTALYPPKRFLGAARN
IEEGGSLTIIATAMVETGSTGDTVIFEEFKGTGNAELKLDRKIAERRVFPAVDVNPSGTR
KDELLLSPDEFAIVHKLRRVLSGLDPHQAIDLLMSQLRKTKNNYEFLVQVSKNTPGGADG
D
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaaacggacctcatcacggctggtggcagccccgctcccgctgagctgcccaat
tccgtgaccccagaagcctccgccgccgcggacgacagcgcgacgccggcaccggccgcg
acgcgccgcagcggcgcgctgaccagcatggtgctgcccgaactgcgcgcgctggccaaa
gagctcggcatcgacggcgcgtccgggatgcgcaagggcgagctggtggcggcgatccgc
gaacggcgcggagcgagcaacggcgccgcggcgtcgagtgcccccgccgccgacgccgcg
cctgcgccggaaaccggcgccgccgaccaggccgccgacgccacgcccgcacgccgcgag
cgccgcgccgcatcccgtgaccagggcaagcccgccggcgagcagaccgccggcccggag
cagtccgacgccgaacagcccggatccgacaccgccaaggaggcgggacgggagaaccgg
accgagcagcgcggccgggatgcccaggagtccaagcccgaccgatcgggcgacaccgcc
gacaagtccgagaaaccggaccgctcggacagcggctcgggcaaccgtccggacggcgac
caacagggcggccagaaccgcggccgcggggacggcaaccgcgccgagggcggtcgttcc
gacaaccgctcggacaacaaccgcgccgacggcaaccgctccgacaacgatgacgacggc
gagggccggcagggtcggcgcgggcggcggttccgcgatcgccggcgccgcgagcgcggc
ggcggggacggtggcggcggaaacgatcgcgacaccgaactgcgtgaggacgacgtcgtc
cagccggtcgccggcatcctcgacgtgctggacaactacgccttcgtgcggacctccggc
tatctggccggccccaacgacgtctacgtctcgatgaacatggtgcgcaagaacggcctg
cgtcgcggtgacgcggtgaccggcgccgtgcgtgtcgccaaggagggcgacggcggcggg
cagaactcccggcagaagttcaatccgctggtgcgtctcgacagcgtcaacggcaagccg
gtcgaggaggccaagaagcgtccggagttcaacaagctcacgccgctctacccgaaccag
cggctgcgcctcgagacctccggtgacaagctgaccacccgcgtgatcgacctgatcatg
ccgatcggcaagggtcagcgcgcgctgatcgtgtccccgcccaaggccggcaagaccacg
atcatgcaggacatcgccaacgcgatcacccgcaacaacccggagtgccatctgatggtc
gtgctcgtcgacgagcgcccggaagaggtcaccgacatgcaacgctcggtgaagggcgag
gtcatcgcgtcgaccttcgaccggccgccgtcggaccacacccaggccgccgagctggcg
atcgaacgtgccaagcgcctggtcgagcagggcaaggacgtcgtcgtgctgcttgactcg
atcacccgcctgggccgcgcctacaacaacgcctcacctgcgtcggggcgcatcctctcc
ggtggtgtggactcgaccgcgctgtacccgcccaagcgtttcctgggcgcggcgcgcaac
atcgaagaaggcggctcgctgaccatcatcgccaccgccatggtcgaaaccggctccacc
ggtgacacggtgatcttcgaggagttcaagggcaccggcaacgccgagctcaagctcgac
cgcaagatcgccgagcgacgcgtcttcccggccgtcgacgtcaacccgtcgggcacccgc
aaggacgagctgctgctctcgcccgacgagttcgcgatcgtgcacaagctgcgccgggtg
ctgtccgggctggacccgcaccaggccatcgacctgctgatgagccagctgcgcaagacc
aagaacaactacgagttcctggtccaggtctccaagaacacccccggcggcgccgacggc
gactga
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