Mycolicibacterium duvalii: MDUV_03490
Help
Entry
MDUV_03490 CDS
T06492
Symbol
alkA
Name
(GenBank) putative bifunctional transcriptional activator/DNA repair enzyme AlkA
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mdu
Mycolicibacterium duvalii
Pathway
mdu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MDUV_03490 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdu03000
]
MDUV_03490 (alkA)
03400 DNA repair and recombination proteins [BR:
mdu03400
]
MDUV_03490 (alkA)
Enzymes [BR:
mdu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
MDUV_03490 (alkA)
Transcription factors [BR:
mdu03000
]
Prokaryotic type
Helix-turn-helix
AraC family
MDUV_03490 (alkA)
DNA repair and recombination proteins [BR:
mdu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MDUV_03490 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
DUF6233
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
BBX15489
UniProt:
A0A7I7JW12
LinkDB
All DBs
Position
complement(350589..352211)
Genome browser
AA seq
540 aa
AA seq
DB search
MYTDFDRCYRAVQAKDPRFDGWFVTAVLTTKIYCRPSCPVRAPFARNVRFYPTAAAAQRG
GFRACKRCRPDASPGSPEWNVRGDAVARAMRLIADGTVDREGVSGLAVRVGYTVRQLERL
MQAELGAAPLALARAQRAQMARVLIETTEMPFSDVAFAAGFASIRQFNDTVRAVSDVTPT
ALRLRARQRFGCDDTRGTGVLTLRLPVRTPFAYHGLFGHLGATAVPGVEEVRNGAYRRTL
RLPHGGGIVSLTPRADHVHCRLVIDDFRDLAAAIARCRRVLDLDADPAAVIEALSADPAV
ATLVARAPGQRIPRTVDEHELALRVVLGQQVSTAAARTHAGRLAAAYGSPVRDPDGTLAY
LFPAAEQLGDIDPRHLALPQARQRTVTALIRALTNGELVLDSGCDWDDARRALLALPGVG
PWSAEMIAMRGLGDPDAFPATDLGVVAAARRLGLPTTPREVAEHSSRWRPWRSYATQHLW
TALDHAVNHWPPKEGHDGKRAVSDNGQPGRAVDTGRRGQPVGASANGRPDLRTGPGRLGA
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtacaccgacttcgaccgctgttaccgcgccgtccaggccaaggacccgcggttcgac
ggctggttcgtcaccgccgtcctcaccaccaagatctactgtcggcccagctgcccggtg
cgggcgccgttcgcccggaacgtccgcttctaccccaccgcggcggccgcgcagcgaggc
ggtttccgggcgtgtaaacgctgccggcccgacgcgtcacccggttctccggaatggaac
gtccgcggtgacgcggtcgcgcgggcgatgcgtctgatcgccgacggcaccgtcgaccga
gaaggagtcagcggactggcagtccgcgtcggctacacggtgcgccagctcgagcggctg
atgcaggcggagctcggtgcggcgccgctggcgctggctcgggcgcagcgggcccagatg
gcgcgggtgctcatcgaaaccaccgagatgcctttcagcgacgtggctttcgctgccggt
ttcgcaagcattcggcaattcaatgacacagttcgtgccgtcagtgacgtcaccccgacc
gcgttgcgactgcgcgcccggcagcgcttcggctgcgacgacacccgcggtaccggcgtg
ctcacgctgcgactgccggtgcgcaccccgttcgcctaccacggcctgttcggacatctg
ggagcgaccgccgtacccggcgtcgaagaggtccgaaacggggcgtaccgccgcacactg
cggctgccccacggcggcggcatcgtcagcctgacaccgagggccgaccacgtccactgt
cgactcgtcatcgatgacttccgtgacctcgcggcggcgatcgcgcgctgtcggcgagtg
ctcgacctcgatgccgatccggcggcggtcatcgaggccctgagcgccgatcccgcggtc
gccaccctcgtggcacgagcgccggggcaacgcattccgcgcaccgtcgatgaacacgaa
ctggctttgcgggtggtgctgggccaacaggtctccaccgctgcggcgcgcacccacgcc
ggccggctggctgcggcgtacggcagcccggttcgcgaccccgacggcacactggcctac
ctgttccccgcggccgaacaactcggcgacatcgacccccggcacctggcgctgccgcag
gctcggcagcgcaccgtgacagccctgatccgggccctgacgaatggcgaactggtactc
gacagcggctgcgactgggacgacgcgcgtcgggcgctcttggcgctgccgggggtcggt
ccgtggtcggcggagatgatcgcgatgcgaggcctcggagatcccgatgcctttcccgcc
acggatctgggggtcgtcgcggccgcgcgccggctcggattgccgacgacgccccgcgag
gtcgctgaacacagcagtcgctggcggccgtggcggtcctatgcgacgcaacacctttgg
acggcactcgatcacgccgtcaatcactggccaccgaaggaggggcatgatgggaaacgt
gcggtatcggacaatggacagcccggtcgggctgttgacactggccggcgtggacaaccg
gttggcgcatctgcgaatggtcgaccagacctacgaaccggaccgggccggttgggagcg
tga
DBGET
integrated database retrieval system
