Mycolicibacterium duvalii: MDUV_20910
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Entry
MDUV_20910 CDS
T06492
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mdu
Mycolicibacterium duvalii
Brite
KEGG Orthology (KO) [BR:
mdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdu03016
]
MDUV_20910
Enzymes [BR:
mdu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MDUV_20910
Transfer RNA biogenesis [BR:
mdu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MDUV_20910
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
BBX17231
UniProt:
A0A7I7K164
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All DBs
Position
2212842..2214110
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AA seq
422 aa
AA seq
DB search
MPDIDPAGSALESSDSATETDAAPLLAPRDGVPAVSASRSEIARAADLLASGRGPFAVDA
ERASGFRYSNRAYLIQIRRENAGTVLIDPVSHGGDSVEVLAPVAAVLETDEWVLHAADQD
LPCLAEVGIRPTSLYDTELAGRLANFDRVNLAAMVQRLLGLALTKGHGAADWSKRPLPDD
WLNYAALDVEVLTELRDAIASMLEEQGKTDWARQEFEFLRTFEAAPTRRDRWRRTSGIHK
VRDPRALAAVRELWSTRDQIARRRDIAPGRILPDSAIINAATVDPDSVEKLTALPVFGGQ
RQRRSAQVWLDALARARSAEPPSAQEPSTGPPPASRWARRKPEAAARLEAAKAGLTELAQ
QVSVPVENLLSPDVVRRLCWDWTAVADAEAAVDEFLRACSARPWQRELTVPVLAQALTSA
QT
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacatcgaccccgcgggttctgccctggaatcatcggactccgccaccgagacc
gacgccgcgccactcctggcgccccgcgacggggtgcccgccgtgtcggcgagccggagt
gagatcgcccgcgccgccgacctgctcgcgtcgggtcggggcccgttcgccgtcgatgcc
gagcgcgcttcgggattccggtactccaaccgtgcctacctgattcagatccgccgcgag
aacgccggcacggtgctgatcgatccggtcagccacggcggcgactcggtcgaggtcctc
gccccggtagccgcggtgctcgaaaccgacgaatgggtgctgcacgccgccgaccaggac
ctgccgtgtctggctgaggtcgggatccggccgacatcgctctatgacaccgaactcgcc
ggacgccttgccaacttcgaccgggtcaacctcgcggcgatggtgcagcgcttgctcggt
ctggcgctgaccaagggccacggcgcggcggactggtcgaagcgaccgctgcccgacgac
tggctgaactacgccgcgctcgacgtcgaggtgctcaccgaactgcgcgacgcgatcgcc
tcgatgctcgaggaacagggcaaaaccgactgggcgcgacaggaattcgagtttctgcgc
acgttcgaggccgctccgactcgccgggaccgctggcgccgcacctcgggtatccacaag
gttcgcgacccgcgcgcgctggccgcggtccgcgaactgtggagcacccgtgatcagatc
gcccgccgccgcgacatcgcgcccggccgcatcctgcccgacagcgcgatcatcaacgcc
gcgaccgtcgaccccgacagcgtcgagaagttgaccgcgctgccggtgttcggcgggcag
cggcagcggcgcagcgcgcaggtgtggctcgacgcgttggcgcgggcccgatcagccgag
ccgccctcggcgcaggagccatccaccggtcccccgccggcgtcgcgatgggcccgccgc
aaaccggaggccgcggcgcgcctggaggccgccaaagccggcttgaccgagttggcgcaa
caggtttcggtgcccgtcgagaatctgttgtcgccggatgtcgtccgccgcctgtgctgg
gactggaccgcggtcgccgatgccgaagccgcggtggacgagttcctgcgggcgtgctcg
gcgcgcccatggcagcgcgagttgaccgtgccggtgctcgcgcaggcgttgactagcgcg
cagacgtga
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