Mycolicibacterium duvalii: MDUV_21210
Help
Entry
MDUV_21210 CDS
T06492
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
mdu
Mycolicibacterium duvalii
Brite
KEGG Orthology (KO) [BR:
mdu00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MDUV_21210 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdu03021
]
MDUV_21210 (rpoD)
Transcription machinery [BR:
mdu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MDUV_21210 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Nop14
HTH_20
Motif
Other DBs
NCBI-ProteinID:
BBX17261
UniProt:
A0A7I7K1A1
LinkDB
All DBs
Position
2240541..2242043
Genome browser
AA seq
500 aa
AA seq
DB search
MTAPRDRTTERVYVAATKASPATDEPVKRTATKTPAKKAAPAKSANGSAPAKKAAKAAPA
KSAKSRAAKSADAPASRGRAKKATASATPEAADDDLAGGAAEDLDAEPGDDLEAEDTDID
LADIDVDDAGDSSEEESADGDADATPKAGAAAKTDDADDDIDEPSDKDKASGDFVWDEEE
SEALRQARKDAELTASADSVRAYLKQIGKVALLNAEEEVELAKRIEAGLYATQLMAEYAE
KGEKLPAAQRRDMMWICRDGDRAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGL
IRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQ
DLGREPTPEELAKEMDITPEKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAV
DAVSFTLLQDQLQSVLETLSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIES
KTMSKLRHPSRSQVLRDYLD
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgccccgagaccgcacgaccgagagggtgtacgtggcagcgacaaaggcaagc
ccggcaaccgacgagccggtgaagcgcaccgccaccaagacaccagcgaagaaggctgcc
ccggcgaaatcggccaacggttccgcgccggcgaagaaggccgccaaggccgccccggcc
aaatccgccaagtcgcgtgccgccaagtcggccgacgcacccgcatcgcgcggccgcgcc
aagaaagcgaccgcgtcggcgaccccggaagccgccgacgacgacctcgctggtggggcc
gccgaggacctcgacgccgagcccggtgacgacctcgaggccgaggacaccgacatcgat
ctcgccgacatcgacgtcgacgacgccggcgacagctccgaggaagagtccgccgacggt
gacgccgacgccacgccgaaggcgggcgcggcggccaagaccgacgacgccgacgacgac
atcgacgagccgtcggacaaggacaaggcgtcgggcgacttcgtctgggacgaagaggaa
tccgaagcgctgcggcaggcccgtaaggacgccgaactcactgcctcggccgactcggtc
cgcgcctacctcaagcagatcggcaaggtcgcgctgctcaacgccgaggaggaggtggag
ctcgccaaacgcatcgaagccggcctgtatgccacccagctcatggccgagtacgcggag
aagggcgagaagctgcccgccgcgcagcgccgggacatgatgtggatctgccgcgacggt
gaccgcgccaagaaccacctgctcgaagcgaacctgcgtctggtggtgtcgttggccaag
cgctacaccggtcgcggcatggcgttcctggacctcatccaggagggcaacctgggtttg
atccgcgccgtcgagaaattcgactacaccaagggttacaagttctcgacctacgccacc
tggtggattcggcaggcgatcacccgcgcgatggccgatcaggcccgcaccatccgtatc
ccggtgcacatggtcgaggtcatcaacaagctgggccgcatccagcgcgagctgctgcag
gacctgggccgcgagcccacacctgaggagctggccaaagagatggacatcacacccgag
aaggtgctggagatccagcagtacgctcgggagcccatctcgctggaccagacgatcggc
gacgagggtgacagccagctcggcgacttcatcgaggacagcgaggccgtggtggccgtc
gatgcggtgtccttcaccctgctgcaggaccagctgcagtcggtgctggagacgctctcc
gaacgcgaggccggcgtggtgcggctgcgattcggcctcaccgacggccagccccgcaca
ctcgacgagatcggccaggtctacggggtgacgcgcgagcgcatccgccagatcgagtcc
aagaccatgagcaagctccgtcaccccagccgctcgcaggtcctgcgcgactacctggac
tga
DBGET
integrated database retrieval system
