Mycolicibacterium duvalii: MDUV_48320
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Entry
MDUV_48320 CDS
T06492
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mdu
Mycolicibacterium duvalii
Brite
KEGG Orthology (KO) [BR:
mdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mdu03032
]
MDUV_48320 (topA)
03400 DNA repair and recombination proteins [BR:
mdu03400
]
MDUV_48320 (topA)
Enzymes [BR:
mdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MDUV_48320 (topA)
DNA replication proteins [BR:
mdu03032
]
Prokaryotic type
DNA Topoisomerases
MDUV_48320 (topA)
DNA repair and recombination proteins [BR:
mdu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MDUV_48320 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Rep_1B
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
BBX19972
UniProt:
A0A7I7K9A8
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All DBs
Position
5029262..5032132
Genome browser
AA seq
956 aa
AA seq
DB search
MDSEVRPAGNRRKWSKTKLADGDRGSGANGTVRRLVIVESPTKARKIAGYLGSNYIVESS
RGHIRDLPRAAADVPAKYKSEPWARLGVNVDADFEPLYIISPEKKSTVAELKDKLKNVDE
LYLATDGDREGEAIAWHLLETLKPRVPVKRMVFHEITEPAIRAAAEDPRDLDNALVDAQE
TRRILDRLYGYEVSPVLWKKVAPKLSAGRVQSVATRIIVQRERERMAFRSAGYWDVTAEL
DASVSDAQASPPTFTAKLNTVDGRRVATGRDFDSLGAVRKPDEVLVLDEAAANALATGLR
GAQLAVSSVEQKPYTRRPYAPFMTSTLQQEAGRKLRFSSERTMSIAQRLYENGYITYMRT
DSTTLSASAIEAARNQARQLYGEEYLHPSPRQYTRKVKNAQEAHEAIRPAGDVFSTPGQL
HSQLDNDEFRLYELIWQRTVASQMADARGTTLSLRIGGQAQSGEQVVFNASGRTITFPGF
LKAYVESIDDLAGGEADDAESRLPNLTQGQRVDARDLTADGHTTSPPARYTEASLIKALE
DLGIGRPSTYSSIIKTIQDRGYVHKKGSALVPSWVAFAVIGLLEQHFARLVDYDFTAAME
DELDEIAAGHERRTNWLNNFYFGGEHGVEGSIARAGGLKKLVGGNLEEIDAREVNSIKLF
DDAEGRAVNVRVGRNGAYLERMVVDPDNPGELKPQRANLKDELTPDELTLELAEKLFATP
QEGRSLGVDPETGHEIVAKDGRYGPYVTEVLPEPKGGDDGEAGSPAKKGKKPTGPKPRTG
SLFRSMDLETVTLEDALKLLSLPRVVGVDPNTDEEITAQNGRYGPYLKRGTDSRSLATED
QIFSITVDEALKIYAEPKRRGRQGAAAPPLRELGNDPVSGKPMVVKDGRFGPYVTDGETN
ASLRKGDDVLAITDERASELLADRRARGPVKRTKKAPAKKKAAAKKAPAKKATKKS
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggattcagaggtccggcctgcgggcaacagaagaaagtggagcaagaccaaattggct
gacggcgaccgcggcagcggggcaaacggcactgtccggcgactcgtcattgtcgagtcg
cccaccaaagcgcgcaaaatcgctggttacctgggctccaactacatcgtggagtcgtcg
cgcgggcacatccgcgacctgccgcgggccgcggccgacgtgccggccaagtacaagtcc
gagccgtgggcccggctgggcgtcaacgtcgacgccgacttcgaaccgctctacatcatc
agcccggagaagaagagcaccgtcgccgagctgaaggacaagctcaagaacgtcgacgaa
ctctatctggccaccgacggtgaccgcgagggtgaggcgatcgcctggcacctgctcgag
accctcaagccccgggtgccggtcaaacggatggtgttccacgaaatcaccgaacccgcg
atccgcgccgccgccgaggatccccgcgacctggacaacgcgctggtcgacgcccaggag
acccggcgcatcctggaccggctctacggctacgaggtctctccggtgctgtggaagaag
gtcgcgcccaagctgtcggccgggcgggtgcagtcggtggccacccgcatcatcgtgcag
cgcgaacgcgaacgcatggcgttccgcagcgccggatactgggatgtcaccgccgagctg
gacgccagcgtctccgacgcccaggccagcccgccgaccttcaccgccaagctcaacacc
gtcgacgggcgccgcgtggccaccggccgtgacttcgactccctcggcgcggtccgcaag
cccgacgaggtgctggtcctcgacgaggcggcggccaacgcgctggccaccggcctgcgc
ggggcccagctggcggtctcgtcggtcgagcagaagccctacacccgtcgtccctacgcg
ccgttcatgacctcgacgctgcagcaggaggccggccgcaagttgcggttctcctccgag
cgcacgatgagcatcgcccagcggctctacgagaacggctacatcacctacatgcgtacc
gactcgacgacgctgtcggccagcgctatcgaagccgcccgcaaccaggcccgccagctc
tacggcgaggagtacctgcacccgtcgccgcggcagtacacccgcaaggtgaagaacgcc
caggaggcccacgaggccatccgtcccgccggcgacgtgttctccacgcccggccagctg
cacagccagctcgacaacgacgagttccggctctacgagctgatctggcagcgcactgtg
gcctcccagatggccgatgcccgcggcaccacgctgagcctgcgtatcggcgggcaagcc
cagtcgggtgagcaggtcgtgttcaacgccagcggtcgcaccatcacgttcccgggcttc
ctcaaggcctatgtggagagcatcgacgacctggccggcggcgaggccgacgacgccgag
agccggttgccgaacctgacccaggggcagcgggtcgacgcccgggacctgaccgccgac
ggccacaccacctcgccaccggcgcgctacaccgaagcatcgttgatcaaggcgctcgag
gacctcggcatcggccgcccgtcgacctacagctcgatcatcaagaccatccaggaccgt
ggctacgtgcacaagaagggcagcgcactggtcccgtcctgggtcgcgttcgccgtcatc
ggcctgctcgaacagcacttcgcccgcctggtcgactacgacttcaccgctgcgatggag
gacgaactcgacgagatcgcggcaggccatgagcgaaggaccaactggctcaacaacttc
tacttcggtggcgagcacggcgtggaaggatcgatcgcgcgggccggcggtctgaagaag
ttggtcggtggcaatctcgaggagatcgacgcccgagaagtcaactccatcaagctgttc
gacgatgccgaaggacgcgcggtcaacgtccgggtgggccgcaacggtgcctatctggaa
cggatggtcgtcgatcctgacaaccctggcgagctcaaaccccagcgggccaacctcaaa
gacgagctgacccccgacgagctgacgctggaactggccgaaaagctcttcgccacaccg
caggaaggccggtcactcggtgtcgacccggaaacgggtcacgagatcgtcgccaaggac
ggccggtacggaccgtacgtcaccgaggtgctgcccgagccgaagggcggcgatgacggc
gaggcgggatccccggcgaagaagggcaagaagccgaccggtcccaagccgcgcaccgga
tccctgttccgcagcatggatctggagacggtgaccctcgaggacgcgctgaagctgctc
tcgctgccccgggtggtcggcgtggacccgaacaccgacgaggagatcaccgcacagaac
ggtcgctacggcccgtacctcaagcgcggcaccgattcccggtcgctggccaccgaggac
cagatcttctcgatcacggtcgacgaggcgctcaagatctacgccgaaccgaagcgccgt
ggcaggcagggcgcggccgccccgccgctgcgcgagttgggcaacgacccggtgtcgggc
aagccgatggtggtcaaggacggccgtttcgggccgtatgtcaccgacggggagaccaac
gccagcctgcgcaagggcgatgacgtgctggccatcaccgacgaacgcgcctccgaactg
ctggccgaccgccgcgcccgcggcccggtgaagcggaccaagaaggcgccggccaagaag
aaggccgcggcgaagaaggcgcccgccaagaaggccaccaagaagagctag
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