Mogibacterium diversum: C5Q96_01945
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Entry
C5Q96_01945 CDS
T05355
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
mdv
Mogibacterium diversum
Pathway
mdv03030
DNA replication
mdv03430
Mismatch repair
mdv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mdv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C5Q96_01945 (holA)
03430 Mismatch repair
C5Q96_01945 (holA)
03440 Homologous recombination
C5Q96_01945 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mdv03032
]
C5Q96_01945 (holA)
03400 DNA repair and recombination proteins [BR:
mdv03400
]
C5Q96_01945 (holA)
Enzymes [BR:
mdv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C5Q96_01945 (holA)
DNA replication proteins [BR:
mdv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C5Q96_01945 (holA)
DNA repair and recombination proteins [BR:
mdv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C5Q96_01945 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
AVM47684
UniProt:
A0A2S0L379
LinkDB
All DBs
Position
415904..416953
Genome browser
AA seq
349 aa
AA seq
DB search
MSFKEFSKDIKSGVIGSNIFLYGEEGFLTDWAVKGIVESNSSEVDRKYVVTDLDGETVTA
QEIVETANTMTMFASTRVLTVKNYQPLIKKSSVTETAPILEYLSSPNPSTILLFYLEPLV
SPGKKEKLNAFASKVSGLCSTYNFERLNPSELKSFVNKRIRSAGKLIGARDMDYLVDISG
YLNNDSEYDLYRMESDLTKLVNASDEDSVSKQLIEEIMVGDKDRFVFNFIDYLLAGKKNM
AMQLLINTISAGENSKGKGNVFSLASTLIGQFEIMYDSLELDDEGMPIKAMAKNLGVNEY
RLKKAYSAARKVGKPKIKKALIELYDTDRLLKTGEMDKNTSLELFVFNW
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttaaagagtttagtaaagatataaagagtggcgtaataggcagtaatattttt
ctctatggcgaagagggattccttactgactgggctgtaaagggaattgtagaaagcaat
tcgagtgaggttgacagaaaatacgtggtaacagatctcgatggagagactgtaacagcg
caggaaatcgttgaaactgctaataccatgaccatgtttgccagcacaagggtattgacg
gttaaaaattatcagccactaataaaaaagagctccgtaactgaaactgctccgattcta
gagtatctcagcagcccaaatccatcgacgattctcttattttatctggagccacttgtg
agccctggcaagaaggagaagttaaatgcttttgctagcaaagtatcggggttatgcagt
acatataatttcgagaggctgaatccatcggaacttaaatcatttgtaaacaagcgaatt
cgctcagccggaaagctgattggtgctcgcgatatggattacctcgtagatatatccgga
tatctcaataatgacagcgaatatgatttatacaggatggaatcggaccttacgaagcta
gtaaatgcttctgatgaagatagtgtatcaaagcagctcatagaagagataatggttggt
gataaggatagatttgtgtttaacttcattgactatctactagctggtaagaaaaacatg
gctatgcagcttttgataaataccatttctgctggtgaaaactcaaaaggtaaaggaaat
gttttctcacttgcgtctacgttaataggtcagtttgagattatgtatgattcgctagaa
ctagatgacgaaggtatgcctatcaaggctatggctaagaaccttggagtgaatgagtat
cgtttaaaaaaggcatactctgcagctagaaaagttggtaagcctaagataaaaaaagca
ttaattgagctatacgatactgatagattgctaaagacaggcgagatggataagaataca
tcacttgagctatttgtctttaactggtag
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