Mogibacterium diversum: C5Q96_01985
Help
Entry
C5Q96_01985 CDS
T05355
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
mdv
Mogibacterium diversum
Brite
KEGG Orthology (KO) [BR:
mdv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mdv03009
]
C5Q96_01985
Enzymes [BR:
mdv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
C5Q96_01985
Ribosome biogenesis [BR:
mdv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C5Q96_01985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Cons_hypoth95
FtsJ
Methyltransf_4
PrmA
TRM5-TYW2_MTfase
Methyltransf_11
UPF0020
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
AVM47691
UniProt:
A0A2S0L308
LinkDB
All DBs
Position
423683..424852
Genome browser
AA seq
389 aa
AA seq
DB search
MENFKICPISEHCGGCLYQGVSYEEQRAEKENIIREQLTRRKVDDSVFCGLVPALSEYRY
RNKMEYTFGDLEIGGELTLGMHKKRHFMSIVTCDECQLVPMDFNRVLRATLDFCVEKGYS
FYHKKSHQGLLRNLVVRHGVKTNELLVNIVTSSEDGFDEQAYLDMLLGLKLDNELIGVMR
TFNDSLADAVINEGVKILFGRDYYNEEILGLKFKVNAFSFFQTNIEAVERLYSEALALIP
ELDSKVVYDLYCGTGTISQLMASKAKKVYGIEIVQDSVDAAIDNAKMNNIDNCHFICGDV
KAKLDEVTEKPDMIVVDPPRMGMHDKVVEMLSSYGIEQILYISCNPNTMAMNLEKFSELG
YEPVVMKAYDNFPKTKHVESVTLLSRTTL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggagaattttaagatctgtccgatctccgagcactgcggaggatgtctgtatcagggt
gtctcatatgaagagcagcgcgcggagaaggaaaatataatcagagagcagctgacgagg
cgcaaggtcgacgattctgtattctgtggtctagttccggctctctcagaatacagatat
agaaataagatggagtatacgttcggcgaccttgaaatcggtggtgaacttaccctaggt
atgcacaagaagagacacttcatgtcgattgttacatgcgacgaatgtcaactggttcct
atggacttcaacagggtgcttcgtgcaacacttgatttctgtgtagaaaaaggatattcg
ttctatcataagaaatcgcatcaaggtcttcttcgtaatctcgtagttcgtcacggagta
aagactaatgagctgctagttaacatagttacaagcagtgaagatggatttgatgaacaa
gcttaccttgatatgctgctaggacttaagctagataatgagcttatcggtgttatgcgc
acgttcaatgatagcctagcagatgccgtaatcaacgaaggagtaaaaattctatttggc
cgtgattactacaacgaggaaattctcgggctaaagtttaaggtaaatgccttttcattc
ttccaaactaatatcgaagcggttgaaagattgtatagcgaagcgcttgcgctaattccg
gaacttgactcaaaagtcgtatacgacctgtactgcggaactgggaccatttctcagctt
atggcatctaaagccaagaaggtgtacggaattgagatagtgcaggattcagttgatgca
gcaattgataatgccaagatgaataatatagataactgtcattttatctgcggcgacgtt
aaagcgaagcttgatgaggtgactgagaaacccgatatgatagttgtggatccaccacga
atgggaatgcacgacaaggtagtggagatgctgtctagctacggcatagaacagattctc
tatatctcatgtaatcctaataccatggcgatgaatttggagaagttctctgagctgggg
tacgagcctgtggtgatgaaggcgtatgataattttccgaagacgaagcatgtggagtcg
gtaacactactttcacgaactactctatag
DBGET
integrated database retrieval system
