KEGG   Mogibacterium diversum: C5Q96_03355
Entry
C5Q96_03355       CDS       T05355                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
mdv  Mogibacterium diversum
Pathway
mdv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mdv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C5Q96_03355 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdv03019]
    C5Q96_03355 (rny)
Messenger RNA biogenesis [BR:mdv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     C5Q96_03355 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B ATP-synt_B KH-I_KHDC4-BBP EpuA
Other DBs
NCBI-ProteinID: AVM47925
UniProt: A0A2S0L3T8
LinkDB
Position
complement(717371..718915)
AA seq 514 aa
MTPLLITMVAGIAFLIIGLLLGYSVRKRVGEKEIGSAEQKAQNIILDAESSAENLKKEKV
LEAKEEVHQIKENLENEIRDRRNEVTRAERRILQKEENIEKKLESIERREEGLSKRERSM
DEKHKEIDQYIEKQIAELEKISGYSKDEAKHLLLEEIEKDVRKDASAIITRVEEETKDEA
DKKAREIITLAIQRCAADQVAETTVSVVALPNDDMKGRIIGREGRNIRAIETLTGVDLII
DDTPEAVILSGFDPVRREIAKRALEKLISDGRIHPARIEEMVQKATKEVNNIIKEEGEQA
CFETGVHNLHPEMVKLLGRLKYRTSYGQNVLKHSVEVALLAGMMASELGLDPRLAKRAGL
LHDIGKSIDHEVEGTHVEIGVNICKKYKESWKVINGVEAHHGDVEATTLEAVLVGAADAL
SAARPGSRRETLEAYIKRLQSLENIANTTKGVDKSYAIQAGREIRVAVKPNQVKDDEIPM
LAREIAKKIEAELEYPGNIKVNVVRETRAIDYAK
NT seq 1545 nt   +upstreamnt  +downstreamnt
atgacaccgctattaataactatggtggctggtatagcgttcctgattattggattgcta
cttggctacagtgtgcgtaagcgtgtcggagagaaagaaattggaagtgcagagcaaaag
gctcagaacataattcttgatgcggaaagttccgctgagaatctcaagaaagaaaaggtt
cttgaagccaaagaagaggtgcaccaaatcaaggaaaatctcgagaacgaaattcgcgac
agacgtaatgaggttacaagagctgaaagacgtattcttcagaaggaagaaaacattgaa
aagaaactagaaagcatcgagcgtagagaagagggtttatcaaaacgtgagcgctcaatg
gatgagaagcataaggaaatcgatcagtacattgagaagcagattgctgaacttgagaag
atttccggttactcaaaggatgaggcaaagcacctcttgcttgaagaaatcgagaaggat
gttagaaaagatgcctcggccattataactagagttgaagaagaaactaaggatgaggca
gataagaaggctagagagataattactttagcaattcaaagatgtgcggctgaccaggtt
gcagagacgactgtttcagtagtggcacttcctaacgatgatatgaaaggtcgtatcatc
ggaagagaaggaagaaatatcagagctattgagacactaactggagttgacttaatcatc
gacgatacaccagaggcggtaattttatcaggattcgatccagtaagaagagagatcgct
aaaagagcgctcgagaagcttatttcagacggaagaattcatccagcgcgcatcgaggag
atggtacagaaggctacaaaggaagtcaataacattatcaaggaggagggtgaacaggct
tgcttcgagacaggtgttcacaatctccatcctgagatggttaagcttttaggtagacta
aaatacagaacttcatatggtcaaaatgtgttaaagcactccgtagaagttgctctcctt
gcaggtatgatggcttcggaactagggcttgatccaaggttagcaaaacgagcaggatta
ctccacgatattggaaagtctattgatcacgaagttgaaggaacacatgtagagataggt
gtaaatatctgcaagaagtataaggagtcctggaaggttatcaatggagttgaagctcac
cacggagatgttgaagcaacgacacttgaagcagttcttgtaggtgctgcagatgctcta
tctgctgctagaccaggctcaagaagagagactcttgaagcttatataaagagacttcag
agcctagagaatattgcaaatactactaaaggcgttgataaatcatatgctattcaagct
ggtcgtgaaatcagagttgcagttaagccaaaccaggttaaggatgatgaaattccgatg
ttggctagagaaattgctaagaagattgaagctgagcttgagtatcctggtaacatcaag
gtcaatgtagtcagagagactcgcgcaatagattatgcaaagtaa

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