Mogibacterium diversum: C5Q96_03355
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Entry
C5Q96_03355 CDS
T05355
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
mdv
Mogibacterium diversum
Pathway
mdv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C5Q96_03355 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdv03019
]
C5Q96_03355 (rny)
Messenger RNA biogenesis [BR:
mdv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C5Q96_03355 (rny)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
ATP-synt_B
KH-I_KHDC4-BBP
EpuA
Motif
Other DBs
NCBI-ProteinID:
AVM47925
UniProt:
A0A2S0L3T8
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Position
complement(717371..718915)
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AA seq
514 aa
AA seq
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MTPLLITMVAGIAFLIIGLLLGYSVRKRVGEKEIGSAEQKAQNIILDAESSAENLKKEKV
LEAKEEVHQIKENLENEIRDRRNEVTRAERRILQKEENIEKKLESIERREEGLSKRERSM
DEKHKEIDQYIEKQIAELEKISGYSKDEAKHLLLEEIEKDVRKDASAIITRVEEETKDEA
DKKAREIITLAIQRCAADQVAETTVSVVALPNDDMKGRIIGREGRNIRAIETLTGVDLII
DDTPEAVILSGFDPVRREIAKRALEKLISDGRIHPARIEEMVQKATKEVNNIIKEEGEQA
CFETGVHNLHPEMVKLLGRLKYRTSYGQNVLKHSVEVALLAGMMASELGLDPRLAKRAGL
LHDIGKSIDHEVEGTHVEIGVNICKKYKESWKVINGVEAHHGDVEATTLEAVLVGAADAL
SAARPGSRRETLEAYIKRLQSLENIANTTKGVDKSYAIQAGREIRVAVKPNQVKDDEIPM
LAREIAKKIEAELEYPGNIKVNVVRETRAIDYAK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgacaccgctattaataactatggtggctggtatagcgttcctgattattggattgcta
cttggctacagtgtgcgtaagcgtgtcggagagaaagaaattggaagtgcagagcaaaag
gctcagaacataattcttgatgcggaaagttccgctgagaatctcaagaaagaaaaggtt
cttgaagccaaagaagaggtgcaccaaatcaaggaaaatctcgagaacgaaattcgcgac
agacgtaatgaggttacaagagctgaaagacgtattcttcagaaggaagaaaacattgaa
aagaaactagaaagcatcgagcgtagagaagagggtttatcaaaacgtgagcgctcaatg
gatgagaagcataaggaaatcgatcagtacattgagaagcagattgctgaacttgagaag
atttccggttactcaaaggatgaggcaaagcacctcttgcttgaagaaatcgagaaggat
gttagaaaagatgcctcggccattataactagagttgaagaagaaactaaggatgaggca
gataagaaggctagagagataattactttagcaattcaaagatgtgcggctgaccaggtt
gcagagacgactgtttcagtagtggcacttcctaacgatgatatgaaaggtcgtatcatc
ggaagagaaggaagaaatatcagagctattgagacactaactggagttgacttaatcatc
gacgatacaccagaggcggtaattttatcaggattcgatccagtaagaagagagatcgct
aaaagagcgctcgagaagcttatttcagacggaagaattcatccagcgcgcatcgaggag
atggtacagaaggctacaaaggaagtcaataacattatcaaggaggagggtgaacaggct
tgcttcgagacaggtgttcacaatctccatcctgagatggttaagcttttaggtagacta
aaatacagaacttcatatggtcaaaatgtgttaaagcactccgtagaagttgctctcctt
gcaggtatgatggcttcggaactagggcttgatccaaggttagcaaaacgagcaggatta
ctccacgatattggaaagtctattgatcacgaagttgaaggaacacatgtagagataggt
gtaaatatctgcaagaagtataaggagtcctggaaggttatcaatggagttgaagctcac
cacggagatgttgaagcaacgacacttgaagcagttcttgtaggtgctgcagatgctcta
tctgctgctagaccaggctcaagaagagagactcttgaagcttatataaagagacttcag
agcctagagaatattgcaaatactactaaaggcgttgataaatcatatgctattcaagct
ggtcgtgaaatcagagttgcagttaagccaaaccaggttaaggatgatgaaattccgatg
ttggctagagaaattgctaagaagattgaagctgagcttgagtatcctggtaacatcaag
gtcaatgtagtcagagagactcgcgcaatagattatgcaaagtaa
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