Mogibacterium diversum: C5Q96_06000
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Entry
C5Q96_06000 CDS
T05355
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mdv
Mogibacterium diversum
Pathway
mdv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mdv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C5Q96_06000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdv03400
]
C5Q96_06000
Enzymes [BR:
mdv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
C5Q96_06000
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C5Q96_06000
DNA repair and recombination proteins [BR:
mdv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C5Q96_06000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_8
DUF7573
DZR
Ribosomal_S13
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AVM48421
UniProt:
A0A2S0L558
LinkDB
All DBs
Position
complement(1285616..1286578)
Genome browser
AA seq
320 aa
AA seq
DB search
MSRCMRQTKGCAPTILFALFHSVCIIISLKGVAKMPELVEVETARRILAPQVSGCTIEDA
EVRLAKSIKNYSPEEFKKLVLGSKFDTVLRRGKFLIFNMLTPKHEGAPEELKLVAHYRMT
GVLLVTPPGYEELKHTHIVFKLRDDDGTEKELRYIDQRQFGGIWAITTGAEFRATGIGQL
GAEATDDTLEGEYLKGHLAKRKSAIKTGLLDQSVIAGLGNIYTDEILYRCGIIPTRACNS
LTDDEWQALASEIPKMINFMIEKNQISEEDYLAGKGTDYRNTPFLQVYNHAGEECQKCGS
KLERAVIAGRSSVYCPECQE
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagtcggtgcatgagacagactaaaggctgtgcaccgactattttatttgcattattt
cactcggtgtgtattataattagtttgaagggagtagccaagatgcctgaactagtagag
gttgaaactgcgagaaggattctcgcaccacaagtaagtggctgcacaatcgaagatgcc
gaggtgagactggcaaagagtatcaagaattacagtcccgaagagttcaagaagctggtg
ctcggtagtaagtttgataccgtactgcgccgtggtaaatttctgattttcaacatgctc
acaccgaagcatgaaggtgcgccagaggagctcaaactcgtagctcactaccgcatgact
ggcgttctcttggtgacgccacctgggtatgaggaactcaagcacacgcatattgtgttt
aagctgcgagatgatgacggcaccgagaaagagctccgctatatcgaccagaggcaattt
ggcggtatatgggctataacgacaggtgcagaatttagagcgaccggtatcgggcagctc
ggagcagaggcgacggacgatacacttgaaggagagtatctgaagggtcatctagcgaag
agaaagtctgccatcaagacggggctccttgaccaaagcgttatcgcaggccttggaaat
atttacaccgacgaaatcctataccgctgcggaattattccgactagagcttgtaattcg
cttactgatgatgagtggcaggctctcgccagtgagattccgaagatgataaatttcatg
atagaaaagaatcagatttctgaagaggactatttggcaggaaaagggacggattataga
aatactccatttctgcaggtatataatcatgctggagaggaatgtcaaaagtgcggaagc
aagcttgagagagctgtgattgcaggcaggagcagtgtgtactgccctgagtgtcaggag
tga
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