Mycobacterium dioxanotrophicus: BTO20_07025
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Entry
BTO20_07025 CDS
T05102
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mdx
Mycobacterium dioxanotrophicus
Pathway
mdx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mdx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BTO20_07025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdx03400
]
BTO20_07025
Enzymes [BR:
mdx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BTO20_07025
DNA repair and recombination proteins [BR:
mdx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BTO20_07025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
PDDEXK_1
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
ART68362
UniProt:
A0A1Y0BZN5
LinkDB
All DBs
Position
complement(1471833..1475105)
Genome browser
AA seq
1090 aa
AA seq
DB search
MKVFDLLGPLPSPNTTTVLEASAGTGKTFALAGLVTRLVAEGAATLDQMLLITFGRAASQ
ELRERVRDQIVCALAALTDPARARNDLETYLIAEDQDARRQRLRDALAGFDAATIATTHQ
FCQIVLKSLGVAGDSDSGVTLVESLDELVCEIVDDLYLSRFGAQKDHPLLDYAAALRLAR
TVVGNPATELRPTDPDPDSAATVRLSFARDVLAELEIRKRRRGVLGYDDLLTRLATALQP
EDSPARVRMHQRWPIVMVDEFQDTDPVQWQVIERAFSGHSTLILIGDPKQAIYAFRGGDI
DTYLRAAATAGDKQTLGTNWRSDSALVDRLQVVLRGAQLGGSDIVVHEVEAHHQGHRLAG
APHNDPFRLRVVGRNGKDAKTIPIDRLRTHIGRDLAADIGALLTSGATFEGRPVQAHDIA
VITETHKDARACHTALLTAGIPAVYTGDSDVFNSEAAEDWLYLLEAFDQPHRTGLVRAAA
ATMFFGETAESLAAGGDALTDRIADTLRTWAGQARERGVAAIFEAAQLAGMGRRVLSWQG
GERLMTDLAHMTQLLGDTAHREGFGLPALRDWLRTQRSEGGGETERNRRLDSDAAAVQIM
TVWVSKGLQYPIVYLPFTFNRYVPEPDLILFHDDGVRCLHIGGGDLSSSRAGHDPAVARA
GRAEAAADDSRLTYVAMTRAQSQVVAWWAPSRDEPNGGLSRLLRGRRPGESAVPDKCTPV
KIGDADALDRLRAWEAAGGPVIEESVVEGFTPVPTPAPAEHLATRHFHRAIDTSWRRTSY
SGLLRAADDPGVTSEPEVTELDDEVNVVDDVLAVPTVAGSDVPSPMAQLPTGAAFGSLVH
AVLETADPFAADLGAELAAQVREHAARWPVEVGSDELAAALVPMHDTPLGPLAPGVTLRQ
IALRDRLRELDFEFPMAGGDLRAGTFARLSDVGALLSTHLPANDPMASYAQRLSGGVLGN
QPLRGYLSGSVDAVLRIGSRFVVVDYKTNWLGTGDAELTAADYTRDRMAEAMLHSDYPLQ
ALLYSVVLHRFLRWRLPGYDPATHLGGVMYLFVRGMCGAATPVVDGHPAGVFSWEPPAAL
VVAVSELLDA
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggttttcgatctgctcgggccactgccgagccccaacaccaccacggtgctcgaa
gccagcgccgggaccggtaagacgttcgcgctggccggtctggtcacccgtctggtcgcc
gagggcgccgcgacgctcgatcagatgctgctcatcacgttcggccgggccgccagccag
gaactgcgggagcgggtccgcgatcagatcgtctgcgccctggccgcattgactgatccc
gcccgggctcgcaatgatctggagacctacctgatcgccgaggatcaggatgcccgcaga
caacggctgcgcgacgctctggccggattcgacgcggcgaccatcgccaccacccatcag
ttctgccagatcgtgctgaaatcccttggcgtcgccggtgacagcgactccggggtgacg
ctggtggagagccttgacgagctggtctgcgagatcgtcgacgacctgtacctgtcccgc
ttcggcgcccagaaagatcacccgctgctggattacgccgccgcgctgcgactggcgcgc
accgtggtggggaatccggccaccgagctgcggcccaccgatcccgacccggattcagct
gccaccgttcggctgagcttcgcccgggatgtgctggccgagttggagatccgcaagcgg
cgtcgcggcgtgctgggctacgacgatctgctgacccggttggccaccgcgctgcaaccg
gaagactcaccggcccgggtccgcatgcatcagcgctggcccatcgtcatggtcgacgaa
ttccaggacaccgacccggtgcagtggcaggtgatcgaacgggccttctccgggcactcc
acgctgatactgatcggtgaccccaagcaggccatctacgcgttccgcggcggggacatc
gacacgtacctgcgggccgccgcgaccgccggggacaagcagacgctgggcaccaactgg
cgcagcgacagtgccctggtggaccgtttgcaagtggtgttgcgcggtgctcagctgggc
ggctccgacatcgtggtccacgaggtggaggcccaccaccagggccaccggttggccggt
gcaccgcacaacgacccgttccggctaagggtggtgggccgaaacggcaaggacgccaag
accattccgatcgaccggctccgcacccacatcggccgagatctggccgccgatatcggg
gcactgttgaccagcggggccacgttcgagggcaggccggtgcaggcccacgacatcgct
gtcatcaccgagacccacaaggacgcccgggcctgccacaccgccttgctgacggccggg
atcccggcggtgtacaccggggactccgatgtgttcaactccgaggccgccgaggattgg
ctgtatctgctggaggcgttcgaccagccgcaccgcacggggctggtgcgcgcggccgcg
gccaccatgttcttcggtgagactgccgaatcccttgccgcgggcggggacgcgctgacc
gaccggatcgccgacaccctgcgcacatgggccgggcaggcgcgcgaacgcggggtcgcg
gcgatcttcgaggccgcccagctggccgggatgggccgccgcgtgctgtcctggcagggt
ggcgagcgattgatgaccgatctcgcgcatatgacccaactgctgggcgacaccgcccac
cgggaagggttcgggctgcctgcgctccgggactggctgcgcacccaacgctccgagggc
ggcggtgaaaccgagcgcaaccgccgcctggacagcgacgccgcggccgtgcagatcatg
acggtgtgggtcagcaaggggctgcagtacccgatcgtgtatctgccgttcacgttcaat
cgctatgtgcccgaaccggatctgatcctcttccacgacgacggcgtgcggtgtctgcac
atcggaggaggtgatttgtcctcctcgcgtgcgggccacgatccggcggtggcccgggcc
ggccgcgccgaggccgccgccgacgacagcaggctgacctacgtcgcgatgacccgggcc
cagtcccaggtggtggcgtggtgggcgccgtcacgcgacgaacccaacggcgggttgtcg
cggctgctgcggggccgcaggcccggcgagtcggcggtaccggacaagtgcacgccggtc
aagatcggtgacgccgacgcgctggaccggctgcgggcgtgggaggccgcgggcggcccg
gtgatcgaggagtccgtcgtcgaggggttcacccccgtaccgacacccgcgccggccgag
cacctggccacccggcattttcaccgcgccatcgacacctcgtggcggcgcacgtcgtac
tccggcctgcttcgtgcagccgatgatccgggtgtcaccagcgagcccgaggtcaccgaa
ctcgacgacgaggtcaatgtcgtcgacgatgttctcgcggtgcccaccgtcgccggcagc
gatgtcccgtctccgatggcccagctgccgaccggcgcggcgttcgggtccctggtgcac
gcggtactggagaccgccgacccgttcgccgccgacctcggcgccgaattggccgcccag
gtgcgggagcacgcggcgcgctggcccgtcgaggtcgggagcgacgagttggccgccgcg
ctcgtccccatgcacgacactcccctgggcccgctggcgcccggcgtgacgctgcgtcag
atcgcgctgcgagaccggttgcgggaactggacttcgagttcccgatggccggtggcgat
ctgcgggccggcacgttcgcccggctctcggatgtcggcgcactgctgagcacgcatctg
cccgctaacgatcccatggcgtcctacgcccagcggttgtccggcggtgttctcggcaac
cagccgctgcgcggatacctgtcgggttcggttgatgcggtgctgcgcatcggatcccgg
ttcgtggtggtggattacaagaccaactggctgggcaccggcgacgccgaactgaccgcc
gccgactacacccgcgaccgcatggccgaggccatgctgcattcggactatccgctgcag
gcgctgctgtacagcgttgtgctgcaccggttcctgagatggcgattacccggttacgat
ccggcgacgcacctcggcggggtgatgtacctgttcgtccgtggcatgtgcggggccgcg
acgcccgtcgtggacggccatccggccggggtgttcagttgggagccgccggccgcgctc
gtggtcgcagtgtcggagttgctcgatgcttga
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