Mycobacterium dioxanotrophicus: BTO20_09285
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Entry
BTO20_09285 CDS
T05102
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mdx
Mycobacterium dioxanotrophicus
Pathway
mdx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTO20_09285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdx03019
]
BTO20_09285
03009 Ribosome biogenesis [BR:
mdx03009
]
BTO20_09285
Enzymes [BR:
mdx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BTO20_09285
Messenger RNA biogenesis [BR:
mdx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BTO20_09285
Ribosome biogenesis [BR:
mdx03009
]
Prokaryotic type
rRNA helicases
BTO20_09285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
CMS1
P-loop_SecA
Cas3-like_C_2
Cas_CT1975
adh_short
Surface-like_ins_dom
Motif
Other DBs
NCBI-ProteinID:
ART68750
UniProt:
A0A1Y0C0N6
LinkDB
All DBs
Position
1940548..1942263
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AA seq
571 aa
AA seq
DB search
MTSTDSDTGDADPTFADLQIHPSVLQAVADVGYESPSAIQAATIPPMLAGSDVVGLAQTG
TGKTAAFAIPILSKIDTSSRATQALVLAPTRELALQVAEAFGRYGAHLPEINVLAIYGGS
SYGPQLAGLKRGAQVVVGTPGRVIDHLEKGRLDLSRLDYLVLDEADEMLQMGFAEDVERI
LADTPEYKQVALFSATMPPAIRKITSKYLHDPVEVTVKAKTATAENISQRFIQVAGPRKL
DALTRVLEVEPFDAMIVFVRTKQATEEVAERLKARGFSAAAINGDIAQAQRERTIAALKD
GKLDILIATDVAARGLDVERISHVVNYDIPHDVESYVHRIGRTGRAGRSGAALLFVTPRE
RHLLKSIEKHTRSKLVESELPSVDDVNAQRVAKFRDSITDGLSAPGIELFRRLIEDYERD
NNVPLADIAAALALQSRDGEAFLMVEPPPEKRRERAERPTREDGPPRKRHETRSDLATYR
IAVGKRHKVAPGAIVGAIANEGGLHRSDFGHISIRVDHSLVELPAKLPRSVFKALENTRI
QGVLIDLQPDRPQRRDRDHQGGASKPHRKAK
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgacagattcggataccggagacgccgatccgacgtttgccgacctgcagatt
cacccctcggtgctgcaggccgtcgccgacgtcggctacgagtcgccctctgcgatccag
gccgccactattccaccgatgctggccggctccgacgtcgtcggcctggcacagacgggc
acgggtaagaccgctgccttcgccatccccatcctgtccaagatcgacacctcgagcagg
gccacccaggccctggtgctggcgccgacacgcgaactcgctttgcaggtggccgaggcg
ttcggtcgctacggcgcgcatctgcccgagatcaatgtgctggccatttacggtggctcg
tcgtacgggccgcagctcgccgggctcaagcgcggcgcgcaggtggtcgtcggcactccc
ggccgggtgatcgatcacctggagaagggcaggctggacctgtcccgcctggattacctc
gtgctcgacgaggccgacgagatgctgcagatgggcttcgccgaggatgtcgaacgcatc
ctggccgacacgcccgagtacaagcaggtcgcgttgttctcggcgaccatgcccccggcc
atccgcaagatcaccagcaagtacctgcacgatccggtcgaggtcacggtcaaggcgaaa
accgcgacggccgagaacatctcgcagcgcttcatccaggtggcaggcccgcgcaagctc
gatgcgctcacccgcgtgctcgaagtcgaaccgttcgacgcgatgatcgtgttcgtccgc
accaagcaggccaccgaggaggtcgccgagcggctcaaggcgcgtggtttctcggcggcc
gccatcaacggcgacatcgcgcaggctcagcgggaacgcaccatcgccgcgctcaaggac
ggcaagctcgacatcctgatcgcgacggacgtcgccgctcgcgggctggacgtggagcgc
atcagccacgtcgtcaactacgacatcccgcatgacgtcgagtcctatgtgcaccggatc
ggccgcaccgggcgggccggacgttcgggtgcggcgctgctgttcgtgacgccgcgcgaa
cggcatctgctcaagtcgatcgagaagcacacccggtccaaactggtcgaatccgagctg
cccagcgtcgacgacgtcaacgcgcagcgggtcgcgaaattccgggattccatcaccgat
ggtctcagcgcgccgggtatcgagctgttccggcggctgatcgaggactacgagcgcgac
aacaacgtgccgctcgccgacatcgccgcggcgctggcgctgcaatcccgcgacggcgag
gcgttcctgatggtcgaaccgccaccggagaagcgccgcgagcgtgccgagcggccgacg
cgggaagatggaccgccccgcaaacggcatgagacccgaagcgacctggcgacctaccgc
atcgcggtcggcaagcgccacaaggtcgcgcccggggccatcgtcggcgccatcgccaac
gaaggtggtctgcaccgcagcgacttcggtcacatctcgatccgggtcgaccactcgctc
gtcgagctgcccgccaagctgccccgaagcgtgttcaaagctcttgagaacacccgtatt
cagggcgtgctgatcgaccttcagccggaccgtccccagcgccgggaccgcgaccaccaa
ggtggtgcatccaaaccccaccggaaggccaagtga
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