Mycobacterium dioxanotrophicus: BTO20_21240
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Entry
BTO20_21240 CDS
T05102
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mdx
Mycobacterium dioxanotrophicus
Brite
KEGG Orthology (KO) [BR:
mdx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdx03016
]
BTO20_21240
Enzymes [BR:
mdx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BTO20_21240
Transfer RNA biogenesis [BR:
mdx03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BTO20_21240
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
ART70725
UniProt:
A0A1Y0C6Q2
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All DBs
Position
4376284..4377537
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AA seq
417 aa
AA seq
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MTDGESDHPEAPAEPEATPLLAPAGGVPEVCVSAQEIASAATLLAHGTGRFAIDAERASG
FRYSNRAYLVQIRRAGAGTVLIDPVNHGGSPIDALAPVAHTLESDEWVLHAADQDLPCLA
EIGLRPARLYDTELAGRLAGFERVNLAAMVQRLLGLQLMKGHGAADWSKRPLPGDWLNYA
ALDVEVLLELRDAIAEVLEEQGKTDWATQEFEFLRTYVAQPTRRDRWRRTSGIHKVRNPR
ALAAVRELWTTRDNIARSRDIAPGRILPDSAIVNAATADPKTVDELTALPIFGGSKQRRT
AQVWLDALERARQNPDPPSATEAQNGPPPAARWSRRKPEAAARLEAARAGLTDLSARVSV
PAENLITPEVVRRLCWDWQPVSDVATAVEEFLVEAQVRPWQRELTVPILTAALSTET
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgacagacggggaatcagaccatcccgaggcgccggccgagccggaggccactccgctg
ctcgcgcccgcaggcggcgtacccgaagtgtgcgtgagcgcccaggagatagcctcggcg
gcaacgcttctcgcccacggcacgggccgcttcgccatcgacgccgaacgggcctcgggg
ttccgctactccaaccgggcttacctggtgcagatccggcgcgccggggcgggcactgtg
ctgatcgatccggtgaaccacggaggttcgccgatcgacgcgctggcccctgtggcgcac
acgctggaatccgacgagtgggtgttgcatgccgccgaccaggatctgccgtgcctggcc
gagatcgggttgcgcccggcccggctctatgacaccgaactggccggccggctcgccggg
ttcgaacgggtcaatctggccgccatggtgcagcggcttctcggcctgcagttgatgaag
ggccacggcgccgcggactggtccaagcggccactgcccggcgactggctcaactacgcc
gcactcgatgtcgaggtgctgttggagctgcgcgacgcgatcgccgaggttctcgaagag
cagggcaaaaccgactgggccacacaggaattcgaatttctgcggacctacgtcgcgcag
cccacccgacgcgaccggtggcggcgcacctcaggcatccacaaggtccgcaatcctcgc
gcgctggccgccgtgcgcgaactgtggaccacccgcgacaacatcgctcgcagccgcgac
atcgcgccgggccgcatcctgcccgactcggcgatcgtcaacgccgccacggccgatccg
aagaccgtcgacgagttgaccgcgctgcccatcttcggcggatccaagcaacggcggacc
gcgcaggtctggctcgacgccctggagcgtgcccggcagaatcccgatccaccgtcggcg
accgaagcccagaacggcccgccaccggcggcccgttggagcaggcgcaaacccgaggcc
gcggcccggctggaggccgcccgggcgggcctgacggacctgtccgcacgggtgtcggta
cccgccgagaacctcatcacccccgaggtggtgcgccggttgtgctgggattggcagccg
gtgtccgacgtcgcgactgcggtcgaggagttcctggtcgaggcccaggttcggccctgg
caacgcgagctgacggtgccgatcctgactgcggcgctgtccaccgaaacctga
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