KEGG   Mycobacterium dioxanotrophicus: BTO20_22215
Entry
BTO20_22215       CDS       T05102                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
mdx  Mycobacterium dioxanotrophicus
Pathway
mdx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mdx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BTO20_22215
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdx03019]
    BTO20_22215
Messenger RNA biogenesis [BR:mdx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BTO20_22215
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B_2 Lactamase_B Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: ART70890
UniProt: A0A1Y0C6N4
LinkDB
Position
complement(4578874..4580550)
AA seq 558 aa
MSTDLAPPEPLAPGGLRVTALGGISEIGRNMTVFEHLGRLLIVDCGVLFPGHDEPGVDLI
LPDLRHIEHRLDDVEALVITHAHEDHIGAIPFLLKLRPDIPVVGSKFTIALVREKCREHR
IKPVFVEVAERQSSTHGVFECEYFAVNHSIPGCLAVAIHTGAGTVLHTGDIKLDQMPLDG
RPTDLPGMSRLGDSGVDLFLCDSTNSEHPGVSPSESEVGPTLHRLIRGAEGRVIVACFAS
NVDRVQQIIDAAVALGRKVSFVGRSMVRNMGIARELGYLRVEDSDILDIGAAEMMPAQKV
VLITTGTQGEPMAALSRMSRGEHRSITLTAGDLIILSSSLIPGNEEAVYGVIDALAKIGA
RVVTNAQARVHVSGHAYSGELLFLYNGVRPRNVMPVHGTWRHLRANAALAARTGVPPENI
VIAENGVSVDLVAGRASISGAVTVGKMFVDGLITGDVGDATLGERLILSSGFVAVTVVVH
RGTGRPAGPAHLHSRGFSEDPKALESVAQKVERELESLAAENITDPTRIAQAVRRTVGKW
VGETYRRQPMIVPTVIEI
NT seq 1677 nt   +upstreamnt  +downstreamnt
ttgagcaccgatctcgcgccgcccgagccgctggcccctggagggctacgtgtcaccgcg
ctgggcggcatcagcgaaatcgggcgcaacatgaccgttttcgagcatctgggccggctg
ctcatcgtcgactgcggcgtgttgttccccggtcacgacgagccgggcgtcgacctgatc
ctgcccgacctgcggcacatcgagcatcgcctcgacgatgtcgaggcgctcgtcatcacc
catgcgcacgaggaccacatcggcgccatcccgttcctgctcaagctgcggcccgacatc
ccggtggtgggctcgaagttcaccatcgcgttggtgcgcgagaagtgccgcgaacaccgg
atcaaacccgtgttcgtggaggtcgccgaacgacagagcagcacgcacggcgtcttcgag
tgtgagtacttcgccgtcaaccactcgattcccgggtgtctggcggtcgcgatccacacc
ggcgcgggcacggtgctgcacaccggcgacatcaagctggaccagatgcccctcgacggt
cgtcccaccgacctgccgggtatgtcgcgccttggggactccggtgtcgacctgttcttg
tgtgattccacgaattctgagcatccgggcgtcagtccgtcggagagcgaggtgggcccg
acgctgcaccggctgatccgcggtgccgagggccgggtgatcgtggcgtgcttcgcgtcg
aacgtcgaccgggtgcaacagatcatcgacgccgcggtggccctgggtcgcaaggtgtcg
ttcgtcgggcgatcgatggtgcgcaacatgggcatcgcgcgcgagctcgggtatctgcgg
gtcgaggattccgacatcctcgacatcggcgcggccgagatgatgcctgcgcagaaggtg
gtactgatcaccaccggcacccagggcgaaccgatggcggcgctgtcgcggatgtcgcgc
ggtgagcaccgcagcatcacgctgaccgcgggcgacctgatcatcctgtcgtcgtcgctg
attccgggcaacgaggaggccgtctacggcgtgatcgacgcgctggccaagatcggggcc
agggtggtcaccaatgcccaagcgcgcgttcacgtttccggccacgcctactcgggcgaa
ttgctgttcctctacaacggtgtgcggccgcgcaacgtcatgccggtgcacggaacctgg
cggcacctgcgtgccaacgcggcgctggccgcccgcaccggggtgccgccggagaacatc
gtgatcgccgagaacggcgtcagcgtggacctggtcgcgggcagggcatcgatatccgga
gccgtgacggtcggcaagatgttcgtcgacggtttgatcaccggtgacgtcggcgatgcc
acgctcggtgaacggctcattctctcatcgggtttcgtcgcggtgaccgttgtcgtgcac
cggggcaccgggcgtcccgcggggccggcgcatctgcattcccgcggcttctccgaggac
cccaaggcgctggaatcggttgcgcagaaggtcgagcgcgaactggaaagccttgccgcg
gagaacatcaccgatcccaccaggatcgcgcaggcggtacggcgcacggtcggcaagtgg
gtgggcgagacctaccgtcgccagccgatgatcgtgccgaccgtgatcgagatctaa

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