Mycobacterium dioxanotrophicus: BTO20_22415
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Entry
BTO20_22415 CDS
T05102
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mdx
Mycobacterium dioxanotrophicus
Pathway
mdx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTO20_22415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdx03019
]
BTO20_22415
03016 Transfer RNA biogenesis [BR:
mdx03016
]
BTO20_22415
Enzymes [BR:
mdx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BTO20_22415
Messenger RNA biogenesis [BR:
mdx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BTO20_22415
Transfer RNA biogenesis [BR:
mdx03016
]
Prokaryotic type
tRNA degradation factors
BTO20_22415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_NusA_1st
KH_PNO1_2nd
OB_cyt-4
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
ART70922
UniProt:
A0A1Y0C736
LinkDB
All DBs
Position
complement(4615581..4617836)
Genome browser
AA seq
751 aa
AA seq
DB search
MSAVELEDGVFEATAVIDNGSFGTRTIRFETGRLAQQAAGSAVAYLDDETMLLSATTASK
NPKDHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR
NEIQVVVTVLSLDPKDLYDVLAINAASASTQLAGLPFSGPVGGTRVALIDGQWVAFPTVE
QLEKAVFDMVVAGRVLEDGDVAIMMVEAEATEKVIELVAGGAQAPTEAVVAEGLEAAKPF
IKVLCAAQQELADAAAKETGDYPVFPDYAEDVYYSVASVATDALSEALTIAGKNERNDRT
DEIKVEVLERLAETYAGREKEIGAAFRSLTKKLVRQRILTDHFRIDGRGITDIRALSAEV
AVVPRAHGSALFERGETQIMGVTTLDMIKMAQQIDSLGPETTKRYMHHYNFPPYSTGETG
RVGSPKRREIGHGALAERALVPVLPSIEEFPYAIRQVSEALGSNGSTSMGSVCASTLALL
NAGVPLKAPVAGIAMGLVSDDVETDGKTERRFVALTDILGAEDAFGDMDFKVAGTKDFVT
ALQLDTKLDGIPSKVLAGALSQAKDARLTILEVMAEAIDRPDEMSPYAPRITTIKVPVDK
IGEVIGPKGKMINSITEETGAQISIEDDGTVFVGAADGPSAQAAIDKINAIANPQLPKIG
ERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGRGKRIAKVEDVVKVGDKLQVEIADIDN
RGKISLVLVAEEETAAEATPAAPADAAPAEA
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagttgaacttgaagacggtgtgttcgaagccaccgccgtcatcgacaacggg
tccttcggcacccgcaccatccgcttcgagaccggacggctggcccagcaggccgccggc
tcggccgtcgcgtacctcgatgacgagaccatgttgctgagcgccaccaccgccagcaag
aaccccaaggaccatttcgacttcttcccgctgacggtcgacgtcgaagagcgcatgtac
gccgcgggccggatccccggctcattcttccgccgtgagggccgtccgtcgaccgacgcg
atcctgacctgccgccttatcgaccgtccgctgcgcccgtcgttcgtcgacggcctgcgc
aacgagatccaggtcgtggtcaccgtgctgagcctggatccgaaggatctgtacgacgtg
ctggccatcaacgctgcgtcggcgtccacgcagctggccggtctgccgttctccggcccg
gtcggcggcacccgcgtcgcgctcatcgacggccagtgggtcgcgttcccgaccgtcgag
cagctcgagaaggccgtgttcgacatggtcgtcgcggggcgcgtactcgaagacggtgac
gtcgcgatcatgatggtcgaagccgaggccaccgagaaggtcatcgagctggtggccggt
ggcgcgcaggcgcccaccgaggccgtcgtcgccgagggcctggaggccgccaagccgttc
atcaaggtgctgtgcgccgctcagcaggagctggccgatgccgccgccaaggagaccggc
gactacccggtcttccctgactacgccgaggacgtctactactcggtcgcatcggtggcc
accgacgccctgtcggaggcgctgaccatcgccggtaagaacgagcgcaacgaccgcacc
gacgagatcaaggtcgaggtgctggagcggctggccgagacctacgccggccgggaaaaa
gagatcggcgccgcgttccggtcgctgaccaaaaagcttgtgcgccagcgcatcctgacc
gatcacttccgtatcgacggccgtggcatcaccgacatccgcgccctgtcggccgaggtg
gccgtggtgccccgggcacacggcagtgcgctgttcgagcgaggcgagacccagatcatg
ggtgtcaccacgctggacatgatcaagatggcccagcagatcgactcgctcggcccggag
accaccaagcgctacatgcaccactacaacttcccgccgtactcgaccggtgagaccggc
cgtgtcggttcgcccaagcgtcgcgagatcggccacggcgcactggccgagcgggccctg
gtgcccgtgctgccgagcatcgaggagttcccctacgccatccgtcaggtctccgaggcg
ttgggctccaacggctccacctcgatgggttcggtctgcgcctcgacgctcgcgctgctc
aacgccggtgtgccgctgaaggctccggtggccggtatcgccatgggtctggtgtccgac
gacgtcgaaaccgacggcaagacggaacgccgtttcgtcgcgctgaccgacatcctcgga
gccgaggacgccttcggtgacatggacttcaaggtcgccggaaccaaggacttcgtcacc
gcgctgcagctggacaccaagctcgacggcatcccgtcgaaggtgctggccggcgcgctg
agccaggccaaggacgcgcggctgaccatcctcgaggtgatggccgaggccatcgaccgt
cccgacgagatgagcccgtacgcgccgcggatcaccaccatcaaggtgcccgtggacaag
atcggcgaggtcatcgggcccaagggcaagatgatcaactcgatcaccgaggagaccggt
gcgcagatctccatcgaggacgacggcacggtcttcgtcggtgctgccgacggcccgtcc
gcgcaggccgcgatcgacaagatcaatgcgatcgccaacccgcagctgcccaagatcggc
gagcggttcctcggcaccgtggtcaagaccaccgatttcggtgcgttcgtctcgctgctg
ccgggtcgcgacggtctggtgcacatctcgaagctgggccgcggcaagcgcatcgccaag
gtcgaggacgtggtgaaggtcggcgacaagctgcaggtcgagatcgccgatatcgacaac
cgcggcaagatctcgctggttctggtggctgaagaggaaacagcagcagaagcgaccccg
gccgcacctgctgatgccgcgcccgccgaagcctga
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