Mycobacterium dioxanotrophicus: BTO20_29020
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Entry
BTO20_29020 CDS
T05102
Name
(GenBank) endonuclease VIII
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mdx
Mycobacterium dioxanotrophicus
Pathway
mdx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mdx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BTO20_29020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdx03400
]
BTO20_29020
Enzymes [BR:
mdx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BTO20_29020
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BTO20_29020
DNA repair and recombination proteins [BR:
mdx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BTO20_29020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
NFACT_N
DUF7577
Motif
Other DBs
NCBI-ProteinID:
ART72052
UniProt:
A0A1Y0CAB6
LinkDB
All DBs
Position
complement(5995773..5996627)
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AA seq
284 aa
AA seq
DB search
MPELPEVEALADHLRRHAIGRAVTRVDVAALSVLKTFDPPVSALHGQTVTGAARWGKYLG
LQAGELYLITHLSRAGWLRWSDKLAPTPLKPSGKGPIALRVHLEGEGFDLTEAGTQKRLA
VWVVRDPADVPQIAALGPDALSLDQSALAAALAGESGRIKNVITDQKVIAGIGNAYSDEI
LHVARLSPFATANKLTEAQLADLHDAMISVLTDAVTRSVGQQAATLKGEKRSGLRVHART
GLPCPVCGDTVREVSFADKSFQYCPTCQTGGKVLADRRMSRLLK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagttgcctgaggtagaggccctcgccgaccacctgcgtcgccatgccatcgga
cgggcggtgacgcgcgtcgacgtggccgcgttgtcggtgctcaagaccttcgacccgccg
gtgtcggcgctgcacgggcagaccgtcaccggcgcggcccggtggggtaagtacctggga
ttgcaggccggtgaactctacctgatcacccacctgtcccgcgccggctggctgcgctgg
tcggacaagctcgcgcccacgccgctcaaaccgtcgggcaaggggccgatcgcgctgcgc
gtgcacctcgaaggggagggcttcgatctcaccgaggccggcacgcagaagcggctcgcg
gtgtgggtggtccgtgacccggccgacgtgccccagatcgcggcgctcgggcccgacgcg
ttgtcactcgatcagtccgcgctggccgccgcgctcgccggcgagagcggccgcatcaag
aacgtgatcaccgaccagaaggtgatcgccgggatcggtaacgcctacagcgacgagatt
ctgcacgtggctaggctgtcgcccttcgcgaccgccaacaagctcaccgaggcccagttg
gccgatctgcacgatgcgatgatctcggtgctcaccgatgcggtgacccgctcggtcgga
cagcaggccgccacgctgaagggcgagaagcggtccgggctgcgcgtgcatgcccgcacc
gggctgccctgccccgtgtgcggggacaccgtgcgggaagtctccttcgcggacaagtct
tttcagtattgcccgacgtgccagaccggcggcaaggtgctggccgaccgacggatgtca
cggctgctgaagtag
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integrated database retrieval system
