Entry |
|
Name |
|
KO |
|
Organism |
mdx Mycobacterium dioxanotrophicus
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:mdx00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BTO20_29910
09124 Replication and repair
03420 Nucleotide excision repair
BTO20_29910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:mdx03021]
BTO20_29910
03400 DNA repair and recombination proteins [BR:mdx03400]
BTO20_29910
Enzymes [BR:mdx01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BTO20_29910
Transcription machinery [BR:mdx03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BTO20_29910
DNA repair and recombination proteins [BR:mdx03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BTO20_29910
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
6175147..6176796
|
AA seq |
549 aa
MTDGPLIVQSDKTVLLEIDHAQAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAG
HDAEQVVDALVSFSRYAVPQPLLVDIVDTMARYGRLQLVKHPAHGLTLVSFDRAVLEEVL
RNKKIAPMLGARIDDDTVIVHASERGRVKQMLLKIGWPAEDLAGYVDGEAHPIELAQDGW
QLRDYQEMAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNTVAGRQWKRE
LVARTSLTEDEIGEYSGEKKEIRPVTIATYQVITRRTKGEYKHLELFDSRDWGLIIYDEV
HLLPAPVFRMTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
AECIEVRVTMTDNERMIYATSEPDERYKLCSTVHSKIAVVRSILERHPNEQTLVIGAYLD
QLEELGQELDAPVIQGSTKNSEREALFDAFRRGDISTLVVSKVANFSIDLPEASVAVQVS
GTFGSRQEEAQRLGRLLRPKADGGGAVFYSVVSRDSLDAEYAAHRQRFLAEQGYGYIIKD
ADDLLGPAI |
NT seq |
1650 nt +upstreamnt +downstreamnt
atgaccgacggcccgctgatcgtgcagtccgacaagacggtgctgctggagatcgaccat
gcacaggccggtgcggcgcgcgcggccatcgctccgttcgccgagctggagcgcgcgccc
gaacacgtacacacctaccgcatcacgccgctggcgttgtggaacgcccgcgcggccggc
cacgacgccgagcaggtggtcgacgcgctggtctcgttctcccgctacgcggtgccccag
ccgctgctggtcgacatcgtcgacaccatggcccgctatggccggctgcagttggtcaag
catccggcgcacgggttgaccctggtcagcttcgaccgcgccgtgctcgaggaagtgctg
cgcaacaagaagatcgcgccgatgctgggggcgcgcatcgacgacgacaccgtgatcgtg
cacgccagcgagcgcggccgggtcaagcagatgctgctcaagatcggctggcccgccgag
gacctggccggctacgtcgacggcgaggcccacccgatcgaactggcgcaggacggctgg
cagctgcgggactaccaggagatggccgccgactcgttctgggcgggcggttccggtgtc
gtggtgctgccgtgcggcgcgggtaagacgctcgtcggggcggcggcgatggcgaaggcc
ggtgcgacgacgctcatcctggtcaccaacaccgtggcgggccggcagtggaagcgcgaa
ctggtcgcccgcacctcgctgacagaagacgagatcggcgagtactccggggagaagaag
gagatccggccggtcaccatcgcgacctaccaggtgatcacccgccgcaccaagggtgag
tacaagcatctggagctgttcgacagccgcgactgggggctgatcatctacgacgaggtg
cacctgctgcccgcaccggtgttccggatgaccgccgatctgcagtcccggcgccggctc
gggctgaccgcgaccctgattcgtgaggacggccgcgagggtgacgtgttctcgctgatc
gggccgaagcgctacgacgccccgtggaaggacatcgaggcccagggctggatcgcccct
gccgagtgcatcgaggtccgggtgaccatgacggacaacgagcggatgatctacgcgacg
tccgagccggacgagcgctacaagctgtgctcgacggtgcacagcaagatcgcggtggtc
cgctcgatcctggaacgccacccgaacgaacagacgctggtgatcggcgcctacctggat
cagctggaggaactcgggcaggagctcgacgccccggtgatccagggctcgacgaagaac
tccgaacgcgaggcgctgttcgacgcgttccgccgcggcgacatctcgacgctggtcgtc
agcaaggtggcgaacttctccatcgatctgcccgaagcgtctgtggccgttcaggtttcg
ggcaccttcgggtcccggcaggaggaggcgcagcggctgggccggctgctgcggccgaag
gccgacggcgggggcgcggtgttctactcggtggtctcgcgtgattcgctggacgccgag
tacgccgcgcaccggcagcggttcctcgccgagcagggttacggctacatcatcaaggac
gccgacgatctgctgggcccggcgatttga |