KEGG   PATHWAY: mea03010
Entry
mea03010                    Pathway                                
Name
Ribosome - Methylorubrum extorquens AM1
Class
Genetic Information Processing; Translation
Pathway map
mea03010  Ribosome
mea03010

Other DBs
PDB: 1FFK 1J5E 4V4A 4YBB 4V6U 4V6X 4UG0 4V88 3A1Y
Organism
Methylorubrum extorquens AM1 [GN:mea]
Gene
Mex_1p0055  rpsA; 30S ribosomal subunit protein S1 [KO:K02945]
Mex_1p0479  rpsP; ribosomal protein S16 [KO:K02959]
Mex_1p1521  rpmI; 50S ribosomal protein L35 [KO:K02916]
Mex_1p1522  rplT; 50S ribosomal protein L20 [KO:K02887]
Mex_1p16S1  [KO:K01977]
Mex_1p16S2  [KO:K01977]
Mex_1p16S3  [KO:K01977]
Mex_1p16S4  [KO:K01977]
Mex_1p16S5  [KO:K01977]
Mex_1p1700  rpmG; 50S ribosomal subunit protein L33 [KO:K02913]
Mex_1p2057  rpsB; 30S ribosomal protein S2 [KO:K02967]
Mex_1p2148  rpsL; 30S ribosomal subunit protein S12 [KO:K02950]
Mex_1p2149  rpsG; 30S ribosomal protein S7 [KO:K02992]
Mex_1p2152  rpsJ; 30S ribosomal subunit protein S10 [KO:K02946]
Mex_1p2153  rplC; 50S ribosomal subunit protein L3 [KO:K02906]
Mex_1p2154  rplD; 50S ribosomal subunit protein L4, regulates expression of S10 operon [KO:K02926]
Mex_1p2155  rplW; 50S ribosomal subunit protein L23 [KO:K02892]
Mex_1p2156  rplB; 50S ribosomal subunit protein L2 [KO:K02886]
Mex_1p2157  rpsS; 30S ribosomal subunit protein S19 [KO:K02965]
Mex_1p2158  rplV; 50S ribosomal subunit protein L22 [KO:K02890]
Mex_1p2159  rpsC; 30S ribosomal subunit protein S3 [KO:K02982]
Mex_1p2160  rplP; 50S ribosomal subunit protein L16 [KO:K02878]
Mex_1p2161  rpmC; 50S ribosomal subunit protein L29 [KO:K02904]
Mex_1p2162  rpsQ; 30S ribosomal subunit protein S17 [KO:K02961]
Mex_1p2166  rplQ; 50S ribosomal subunit protein L17 [KO:K02879]
Mex_1p2169  rpsK; 30S ribosomal subunit protein S11 [KO:K02948]
Mex_1p2170  rpsM; 30S ribosomal subunit protein S13 [KO:K02952]
Mex_1p2173  rplO; 50S ribosomal protein L15 [KO:K02876]
Mex_1p2174  rpmD; 50S ribosomal subunit protein L30 [KO:K02907]
Mex_1p2175  rpsE; 30S ribosomal subunit protein S5 [KO:K02988]
Mex_1p2176  rplR; 50S ribosomal subunit protein L18 [KO:K02881]
Mex_1p2177  rplF; 50S ribosomal subunit protein L6 [KO:K02933]
Mex_1p2178  rpsH; 30S ribosomal subunit protein S8, and regulator [KO:K02994]
Mex_1p2179  rpsN; 30S ribosomal subunit protein S14 [KO:K02954]
Mex_1p2180  rplE; 50S ribosomal subunit protein L5 [KO:K02931]
Mex_1p2181  rplX; 50S ribosomal subunit protein L24 [KO:K02895]
Mex_1p2182  rplN; 50S ribosomal subunit protein L14 [KO:K02874]
Mex_1p2356  rpmH; 50S ribosomal subunit protein L34 [KO:K02914]
Mex_1p2358  rpmE; 50S ribosomal protein L31 [KO:K02909]
Mex_1p23S1  [KO:K01980]
Mex_1p23S2  [KO:K01980]
Mex_1p23S3  [KO:K01980]
Mex_1p23S4  [KO:K01980]
Mex_1p23S5  [KO:K01980]
Mex_1p2440  rplY; 50S ribosomal protein L25 (General stress protein CTC) [KO:K02897]
Mex_1p2739  rplM; 50S ribosomal subunit protein L13 [KO:K02871]
Mex_1p2740  rpsI; ribosomal protein S9 [KO:K02996]
Mex_1p2938  rpmJ; 50S ribosomal protein L36 [KO:K02919]
Mex_1p3182  rpmB; 50S ribosomal protein L28 [KO:K02902]
Mex_1p3696  rpmF; 50S ribosomal subunit protein L32 [KO:K02911]
Mex_1p4149  rpsU; Ribosomal protein S21 [KO:K02970]
Mex_1p4321  rplL; 50S ribosomal protein L9 [KO:K02939]
Mex_1p4323  rpsR; 30S ribosomal protein S18 [KO:K02963]
Mex_1p4324  rpsF; 30S ribosomal protein S6 [KO:K02990]
Mex_1p4385  rplK; 50S ribosomal protein L11 [KO:K02867]
Mex_1p4386  rplA; 50S ribosomal subunit protein L1 [KO:K02863]
Mex_1p4403  rplJ; 50S ribosomal subunit protein L10 [KO:K02864]
Mex_1p4404  rplL; 50S ribosomal subunit protein L7/L12 [KO:K02935]
Mex_1p4417  rpsO; 30S ribosomal subunit protein S15 [KO:K02956]
Mex_1p4855  rpmA; 50S ribosomal protein L27 [KO:K02899]
Mex_1p4856  rplU; 50S ribosomal protein L21 [KO:K02888]
Mex_1p5186  rplS; 50S ribosomal subunit protein L19 [KO:K02884]
Mex_1p5190  rpsD; 30S ribosomal protein S4 [KO:K02986]
Mex_1p5345  rpsT; 30S ribosomal protein S20 [KO:K02968]
Mex_1p5S1  [KO:K01985]
Mex_1p5S2  [KO:K01985]
Mex_1p5S3  [KO:K01985]
Mex_1p5S4  [KO:K01985]
Mex_1p5S5  [KO:K01985]
Reference
PMID:10476961
  Authors
Ban N, Nissen P, Hansen J, Capel M, Moore PB, Steitz TA.
  Title
Placement of protein and RNA structures into a 5 A-resolution map of the 50S ribosomal subunit.
  Journal
Nature 400:841-847 (1999)
DOI:10.1038/23641
Reference
PMID:10476960
  Authors
Clemons WM Jr, May JL, Wimberly BT, McCutcheon JP, Capel MS, Ramakrishnan V.
  Title
Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution.
  Journal
Nature 400:833-840 (1999)
DOI:10.1038/23631
Reference
PMID:10497122
  Authors
Cate JH, Yusupov MM, Yusupova GZ, Earnest TN, Noller HF.
  Title
X-ray crystal structures of 70S ribosome functional complexes.
  Journal
Science 285:2095-2104 (1999)
DOI:10.1126/science.285.5436.2095
Reference
PMID:10937989
  Authors
Ban N, Nissen P, Hansen J, Moore PB, Steitz TA.
  Title
The complete atomic structure of the large ribosomal subunit at 2.4 A resolution.
  Journal
Science 289:905-920 (2000)
DOI:10.1126/science.289.5481.905
Reference
PMID:10937990
  Authors
Nissen P, Hansen J, Ban N, Moore PB, Steitz TA.
  Title
The structural basis of ribosome activity in peptide bond synthesis.
  Journal
Science 289:920-930 (2000)
DOI:10.1126/science.289.5481.920
Reference
PMID:11014182
  Authors
Wimberly BT, Brodersen DE, Clemons WM Jr, Morgan-Warren RJ, Carter AP, Vonrhein C, Hartsch T, Ramakrishnan V.
  Title
Structure of the 30S ribosomal subunit.
  Journal
Nature 407:327-339 (2000)
DOI:10.1038/35030006
Reference
PMID:11014183
  Authors
Carter AP, Clemons WM, Brodersen DE, Morgan-Warren RJ, Wimberly BT, Ramakrishnan V.
  Title
Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics.
  Journal
Nature 407:340-348 (2000)
DOI:10.1038/35030019
Reference
PMID:25775265
  Authors
Noeske J, Wasserman MR, Terry DS, Altman RB, Blanchard SC, Cate JH
  Title
High-resolution structure of the Escherichia coli ribosome.
  Journal
Nat Struct Mol Biol 22:336-41 (2015)
DOI:10.1038/nsmb.2994
Reference
PMID:23222135
  Authors
Armache JP, Anger AM, Marquez V, Franckenberg S, Frohlich T, Villa E, Berninghausen O, Thomm M, Arnold GJ, Beckmann R, Wilson DN
  Title
Promiscuous behaviour of archaeal ribosomal proteins: implications for eukaryotic ribosome evolution.
  Journal
Nucleic Acids Res 41:1284-93 (2013)
DOI:10.1093/nar/gks1259
Reference
PMID:23636399
  Authors
Anger AM, Armache JP, Berninghausen O, Habeck M, Subklewe M, Wilson DN, Beckmann R
  Title
Structures of the human and Drosophila 80S ribosome.
  Journal
Nature 497:80-5 (2013)
DOI:10.1038/nature12104
Reference
PMID:25901680
  Authors
Khatter H, Myasnikov AG, Natchiar SK, Klaholz BP
  Title
Structure of the human 80S ribosome.
  Journal
Nature 520:640-5 (2015)
DOI:10.1038/nature14427
Reference
PMID:20007716
  Authors
Naganuma T, Nomura N, Yao M, Mochizuki M, Uchiumi T, Tanaka I
  Title
Structural basis for translation factor recruitment to the eukaryotic/archaeal ribosomes.
  Journal
J Biol Chem 285:4747-56 (2010)
DOI:10.1074/jbc.M109.068098
KO pathway
ko03010   

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