Methylorubrum extorquens AM1: Mex_1p0003
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Entry
Mex_1p0003 CDS
T00921
Symbol
recF
Name
(GenBank) putative RecF protein
KO
K03629
DNA replication and repair protein RecF
Organism
mea
Methylorubrum extorquens AM1
Pathway
mea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Mex_1p0003 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mea03400
]
Mex_1p0003 (recF)
DNA repair and recombination proteins [BR:
mea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Mex_1p0003 (recF)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
ABC_tran
SbcC_Walker_B
AAA_29
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACS37976
UniProt:
C5AP44
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All DBs
Position
3702..4859
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AA seq
385 aa
AA seq
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MDILPGGPRLTRLIARDFRNHVDLDLATTRRFVALVGENGAGKTNILEAVSLFCPGRGLR
RADLATMARVGGPGGFAVSATLEASEAEHRFGSGYEPPGYDGRGTRVCRIDGANAPSPVA
FSEFLRIVWLTPDFDGLFRGAAGDRRRFLDRLVLAVDAGHGARVSAMERALRSRNRLLDE
RPDDGRWLDAVEREVAELGVAVALARRETVERLDRLIAETRDDAAPFPWASLRLEGDLDD
LVAVWPALEAEDRFRRALMQGRHRDRAAGRTLIGPQTTDLVVRHGPKDVPAATASTGEQK
ALLIGLVLAHARLVRAMSGLAPLILLDEVAAHLDPRRRGGLFDALEALEGQVWMTGADPA
LFAELEGRADMVNIADGRIVASDVG
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggacatactgccgggaggcccccgcctcacccgcctgatcgcccgcgacttccgcaac
cacgtcgatctcgatcttgccaccacccgccgcttcgtggcgctggtcggcgagaacggg
gcgggcaagacgaacatcctcgaagcggtctcgctgttctgccccggtcgcggcctgcgc
cgggccgatctcgcgaccatggcgcgggtcggcggaccgggcggattcgccgtgtcggcg
acgctcgaagcgtcggaggccgagcaccggttcgggtccggctacgagccgccgggctat
gatgggcgcggcacgcgggtctgccggatcgacggcgcgaacgcaccctcccccgtcgcc
ttctcggagttcctgcggatcgtctggctgacgccggactttgatgggctgttccgcggc
gcggccggcgaccggcgccgcttcctcgatcggctcgtccttgccgtcgatgccggccac
ggcgcccgcgtctcggcgatggagcgggccctgcgctcgcgcaaccgcctgctcgacgag
cggcccgatgacggccgctggctcgatgcggtcgagcgtgaggtggccgaactcggcgtc
gccgtggcgctcgcccggcgcgagacggtggagcgcctcgacaggctcatcgccgagaca
cgggacgatgcggcgcccttcccctgggcatcgctccggctagagggcgatcttgacgat
cttgtcgcggtctggccggctttggaggcggaggatcgctttcgccgggcgctgatgcag
ggccgccaccgcgaccgcgccgccggccgcaccctgatcggaccgcagaccaccgacctc
gtcgtgcgccacggccccaaggacgtgcccgccgccacggcttcgaccggcgaacagaag
gccctgctgatcggcctcgtgctcgcccatgcccgcctggtgcgcgcgatgagcgggctt
gcgccgctcatcctcctcgacgaggtcgccgcgcatctcgatccgcgccgccgcggcggg
ctgttcgatgcgctcgaagccttggagggacaagtctggatgacaggcgccgacccggcc
ctcttcgccgagctggaaggccgggccgatatggttaacattgcagacgggcgcatcgtc
gcgtcggacgtcggttga
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