Methylorubrum extorquens AM1: Mex_1p0214
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Entry
Mex_1p0214 CDS
T00921
Symbol
uvrD
Name
(GenBank) DNA-dependent ATPase I and helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mea
Methylorubrum extorquens AM1
Pathway
mea03420
Nucleotide excision repair
mea03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mex_1p0214 (uvrD)
03430 Mismatch repair
Mex_1p0214 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mea03400
]
Mex_1p0214 (uvrD)
Enzymes [BR:
mea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mex_1p0214 (uvrD)
DNA repair and recombination proteins [BR:
mea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mex_1p0214 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
Mex_1p0214 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_12
DUF3553
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ACS38176
UniProt:
C5AP71
LinkDB
All DBs
Position
229042..231429
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AA seq
795 aa
AA seq
DB search
MMQEPNDAHGAFRPRPSDDEAPSAPTSIAARAMAALRPEGASYLSGLNPEQRRAVEATEG
PVLVLAGAGTGKTRVLTTRIAHLIATGKARPYDILSVTFTNKAAREMKHRIGGLIGPAGE
GMPWLGTFHAIGTKILRRHAELVGLKSDFTILGTDDQLRLMKQVISDQNIDEKRWPARSL
AHTIDGWKNRGLSPEQVPPGEAQSFAFGKGGQLYAAYQARLATLNAVDFGDLLLLCLKLW
RENPDILANYQDRFRYILVDEYQDTNVAQYLWLRLLAQARKNVACVGDDDQSIYGWRGAE
VDNILRFEHDFPGATVVRLERNYRSTGHILAAASGLIAKNEGRLGKTLRTEDEAGEPVTV
TGSWDSEEEARQVAESIESLQRRGHALSEIAVLVRISAQMREIEDRFVQVGLPYRVIGGP
RFYERAEIRDALAYLRVTMNGADDLAFERIFNTPKRGLGDATLQTLHAFARADRIPLLAA
ARKLIETDELKPRARSMLRGLVESFTRWVRLVETKPHPEVAQTILEESGYTEMWQKDRSA
DAAGRLENLKEFVRSMEEFPDMAAFLEHVSLVMEASEAEGADRVSLMTLHAAKGLEFDTV
FLPGWEDGLFPNQRAIDESGRAGLEEERRLAHVGLTRARKRAKLSFAVNRRIHGLWSSTI
PSRFIDELPPQAVDVVEAPAHFSAGASRFDRNPTPFGSSYGTPGWQRAQANTSGGFGGGL
NGGQGRGGRASGPREIEGELVAKSTGAPSTFENGQRVFHTKFGPGTVAGIDGNKLTVDFD
KAGRKMVLDSFLQPG
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaagagcccaacgacgcgcacggcgcgttccggccgcgcccgtccgacgacgaa
gcgccgtcggccccgacctccatcgccgcccgcgccatggccgccctgcgacccgagggc
gcgtcctacctctccggcctcaacccggagcagcgtcgcgccgtggaggcgacggagggc
cccgtgctcgtgctggcgggcgcgggcaccggcaagacgcgggttctgacgacgcgcatc
gcccacctcatcgcaaccggcaaggcgcggccctacgacatcctctcggtgaccttcacc
aacaaggccgcccgcgagatgaagcaccgcatcggcgggctgatcgggccggcgggcgag
ggcatgccctggctcggcaccttccacgccatcggcaccaagatcctgcgccgccatgcc
gaactcgtcgggctgaaatccgacttcacgattctcggcaccgacgaccagctccgcctg
atgaagcaggtcatcagcgaccagaacatcgatgagaagcgctggccggcgcgctcgctg
gcgcacaccatcgacggctggaagaaccggggcttgagccccgaacaggtgccgccgggc
gaggcgcagtccttcgccttcggcaagggcgggcagctctacgcggcgtatcaggcccgg
ctcgcgacgctcaacgcggtcgatttcggcgacctcctgctgctgtgcctcaagctgtgg
cgcgagaatccggacatcctggccaactaccaggaccgcttccgctacatcctcgtggac
gagtaccaggacaccaacgtcgcccagtatctctggttgaggcttctcgcccaggcgcgg
aaaaacgtcgcctgcgtcggcgatgacgaccagtcgatctacggctggcgcggcgccgag
gtcgacaacatcctgcgcttcgagcacgatttccccggcgccaccgtggtgcggctggag
cgcaattaccgctcgaccggccacatcctcgccgcggcctccgggctcatcgccaaaaac
gagggacgcctcggcaagaccctgcggaccgaggacgaggcgggcgagcccgtcacggtc
acgggctcatgggattccgaggaggaggcgcgtcaggtcgccgaatcgatcgagtcgctc
cagcgcagggggcacgcgctctcggagatcgcggtgctggtgcggatttcggcgcagatg
cgcgagatcgaggaccggttcgttcaggtcggcctgccctatcgcgtcatcggcggcccg
cgcttctacgagcgggccgagatccgcgacgcgctagcctatctgcgcgtcaccatgaac
ggcgccgacgacctcgccttcgagcgcatcttcaacacgcccaagcgcggcctcggcgac
gcgaccctgcagacgctgcacgccttcgcccgcgccgaccggatcccgctgctcgccgcg
gcgcgcaagctgatcgagaccgacgagctgaagccacgcgcccgctcgatgctgcgcggc
ctcgtcgagagctttacgcgctgggtgcgactggtggagaccaagccgcatccggaggtg
gcgcagaccatcctggaggaatccggctacaccgagatgtggcagaaggaccgttcggcc
gacgccgccgggcggctcgaaaacctcaaggaattcgtccgttcaatggaggaattcccc
gacatggccgccttcctcgaacacgtctccctggtgatggaagcctcggaggcggaaggg
gccgaccgtgtctcgctgatgacgctgcacgccgccaaggggctcgagttcgacaccgtg
ttcctgccgggctgggaggacggccttttcccgaaccaacgcgccatcgacgagagcggg
cgggccggcctggaggaggaacggcgtctcgcccatgtcgggctcacccgcgcccgcaag
cgcgccaagctgtccttcgccgtcaaccggcgcatccacgggctatggtcctcgaccatc
ccctcgcgtttcatcgacgagttgccgccgcaggccgtggacgtggtcgaggcgcccgcg
catttctcggccggcgcctcacgcttcgaccgcaacccgacgccgttcggctcgtcctac
ggcacgccgggctggcagcgggcccaggccaacacctcgggcgggttcggagggggactg
aacgggggacagggccggggtggccgcgcgagcggcccgcgggaaatcgagggcgagctg
gtcgccaaatccacgggcgcgccctccaccttcgagaacggccaacgggtcttccacacc
aagttcggccctggcaccgtggccggcatcgacggcaacaagctcaccgttgacttcgac
aaggccggccggaaaatggtgctcgacagcttcctccaacccggttga
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