Methylorubrum extorquens AM1: Mex_1p1366
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Entry
Mex_1p1366 CDS
T00921
Symbol
ung
Name
(GenBank) Uracil-DNA glycosylase (UDG)
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mea
Methylorubrum extorquens AM1
Pathway
mea03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mex_1p1366 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mea03400
]
Mex_1p1366 (ung)
Enzymes [BR:
mea01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Mex_1p1366 (ung)
DNA repair and recombination proteins [BR:
mea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Mex_1p1366 (ung)
Prokaryotic type
Mex_1p1366 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ACS39228
UniProt:
C5AYW2
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All DBs
Position
1424031..1424735
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AA seq
234 aa
AA seq
DB search
MTGPVEAALAAFRASGSPWLDLPFFREGAADRVAKKVDARVASGATVLPEPAAIFRALTL
TPLPAVKAVILGQDPYPTPGDANGLAFSYVGPRRLPASLKVILAELAPEGEKPDLSTGDL
TPWAERGVLLLNAALTTEAGKSGAHLRFGWSQLTDEAVEAVSARDAPAVFLLWGAQARAR
EALIDTSRHGVIASGHPSPLNRARDFPGSRPFDRANAWLEAQGRAPIDWRLGEG
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggacccgtcgaggccgcacttgccgccttccgcgccagcggctccccctggctc
gacctgcccttcttccgagagggggcggcggatcgggtcgcgaaaaaggtcgatgcgcgc
gtcgcatccggggcgacagtgctgccggagcccgctgcgatcttccgggcgctgacgctg
acgcccctgcccgccgtgaaggcggtgatcctcggccaggatccctaccccacgccgggc
gacgccaacgggctcgccttctcctatgtcggcccgcgccgcctgccggcctcgctcaag
gtgatcctggccgaactcgctcccgagggggaaaagcccgacctctcgaccggcgacctc
acgccctgggcggagcgcggggtgctgcttctgaacgcggcgctcacgacggaggccggc
aagtccggcgcgcatctgcggttcggctggtcgcagctcaccgacgaggcggtggaagcc
gtctccgcccgcgacgcgccggcggtgttcctgctctggggcgcccaggcccgcgcccgc
gaggcgctgatcgacaccagccgccacggcgtcatcgcctcgggccacccctccccgctc
aaccgcgcccgcgactttccgggctcgcggccgttcgaccgggcgaatgcgtggctcgaa
gcgcagggccgcgcgccgatcgactggcggctgggtgagggctga
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