KEGG   Methylorubrum extorquens AM1: Mex_1p1542
Entry
Mex_1p1542        CDS       T00921                                 
Symbol
lpd
Name
(GenBank) dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
mea  Methylorubrum extorquens AM1
Pathway
mea00010  Glycolysis / Gluconeogenesis
mea00020  Citrate cycle (TCA cycle)
mea00260  Glycine, serine and threonine metabolism
mea00280  Valine, leucine and isoleucine degradation
mea00310  Lysine degradation
mea00380  Tryptophan metabolism
mea00620  Pyruvate metabolism
mea00630  Glyoxylate and dicarboxylate metabolism
mea00640  Propanoate metabolism
mea00670  One carbon pool by folate
mea00785  Lipoic acid metabolism
mea01100  Metabolic pathways
mea01110  Biosynthesis of secondary metabolites
mea01120  Microbial metabolism in diverse environments
mea01200  Carbon metabolism
mea01210  2-Oxocarboxylic acid metabolism
mea01240  Biosynthesis of cofactors
Module
mea_M00009  Citrate cycle (TCA cycle, Krebs cycle)
mea_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mea_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
mea_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:mea00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    Mex_1p1542 (lpd)
   00020 Citrate cycle (TCA cycle)
    Mex_1p1542 (lpd)
   00620 Pyruvate metabolism
    Mex_1p1542 (lpd)
   00630 Glyoxylate and dicarboxylate metabolism
    Mex_1p1542 (lpd)
   00640 Propanoate metabolism
    Mex_1p1542 (lpd)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Mex_1p1542 (lpd)
   00280 Valine, leucine and isoleucine degradation
    Mex_1p1542 (lpd)
   00310 Lysine degradation
    Mex_1p1542 (lpd)
   00380 Tryptophan metabolism
    Mex_1p1542 (lpd)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    Mex_1p1542 (lpd)
   00670 One carbon pool by folate
    Mex_1p1542 (lpd)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mea04147]
    Mex_1p1542 (lpd)
Enzymes [BR:mea01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     Mex_1p1542 (lpd)
Exosome [BR:mea04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   Mex_1p1542 (lpd)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 GIDA FAD_oxidored NAD_binding_8 HI0933_like Thi4 AlaDh_PNT_C Lys_Orn_oxgnase DAO FAD_binding_3 3HCDH_N
Other DBs
NCBI-ProteinID: ACS39404
UniProt: C5B054
LinkDB
Position
1613585..1614988
AA seq 467 aa
MSYDLIVIGTGPGGYVCAIRAAQLGLKTAVVEKRATHGGTCLNVGCIPSKALLHASEAFE
EANKHFSELGIDVGTPKLDLKKMQSFKQSGVDGNTKGVEFLLKKNKVDTYHGRGRIAGAG
RVEVISDDGGNQLLETKNIVIATGSDVTRLPGVEIDEKTVVSSTGALELAEVPKRLVVIG
AGVIGLELGSVWRRLGAEVTVIEYLDRVLPGMDGEVGKQFQRILAKQGMVFKLSTKVTGV
ETGKKGRATVTVEPAQGGEPEKLEADVVLVAIGRVPYTEGLGLETVGVATDDKGRIEVDS
HYATNVTGIYAIGDVIAGPMLAHKAEDEGVAVAEILAGQSGHVNYGVIPNVVYTFPEVAS
VGKTEEELKKDGIAYNVGKFPFTANGRAKANGTTDGFVKILADAQTDRVLGVHIVGADAG
NLIAEVAVAMEFAASAEDIARTCHAHPTLTEAIKEAALAVDKRAIHV
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgtcctacgatctcatcgtcatcggcaccggccccggcggctatgtctgcgccatccgc
gcggcccagctcgggctgaagaccgcggtggtcgagaagcgggcgacccacggcggcacc
tgcctcaatgtcggctgcatcccgtccaaggcgctgctgcacgcatcggaagccttcgag
gaggccaacaagcacttttcggagttgggcatcgacgtgggcacgccgaagcttgatctc
aaaaaaatgcagagcttcaagcagagcggcgtggacggcaacaccaagggcgtcgagttc
ctgctcaagaagaacaaggtcgatacctatcacggccgcggccgcatcgccggggccggc
cgcgtcgaggtaatctcggacgacggcggcaaccagttgctggagacgaagaacatcgtc
atcgccaccggctccgacgtgacccggctgccgggcgtcgagatcgacgagaagacggtg
gtctcctccaccggcgcgctcgaactcgccgaggtgcccaagcgcctcgtggtgatcggc
gcgggcgtgatcgggctcgaactcggctcggtctggcgccgcctcggcgccgaggtcacc
gtgatcgagtatctcgaccgcgtgctgccgggcatggacggcgaggtcggcaagcagttc
cagcgcatcctggccaagcagggcatggtcttcaagctctcgaccaaggtgaccggtgtc
gagaccggcaagaagggccgcgccaccgtcaccgtcgagccggcgcagggcggcgagccg
gagaagctcgaggccgacgtggtgctcgtggccatcggccgggtgccctacacggaaggg
ctcgggctcgagacggtgggcgtggcgaccgacgacaagggccggatcgaggtcgattcg
cactacgccaccaacgtcaccggcatctacgccatcggcgacgtgatcgccgggccgatg
ctcgcccacaaggcggaggacgagggcgtcgcggtcgccgagatcctggccggccagtcg
ggccacgtgaattacggcgtgatcccgaacgtcgtctacaccttccccgaggtcgcctcg
gtcggcaagaccgaggaggagctgaagaaggacgggatcgcctacaacgtcggcaagttc
cccttcaccgccaacggccgggccaaggccaacggcaccaccgacggcttcgtgaagatc
ctcgcggacgcgcagaccgaccgggtgctcggcgtgcacatcgtcggggcggatgccggc
aacctcatcgccgaggtcgcggtggcgatggagttcgcagcctccgccgaggacatcgcc
cgcacctgccacgcccacccgacgctgaccgaggcgatcaaggaagccgccctcgccgtc
gacaagcgcgcgatccacgtctga

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