Methylorubrum extorquens AM1: Mex_1p1949
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Entry
Mex_1p1949 CDS
T00921
Name
(GenBank) putative DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mea
Methylorubrum extorquens AM1
Brite
KEGG Orthology (KO) [BR:
mea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mea03032
]
Mex_1p1949
03400 DNA repair and recombination proteins [BR:
mea03400
]
Mex_1p1949
Enzymes [BR:
mea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Mex_1p1949
DNA replication proteins [BR:
mea03032
]
Prokaryotic type
DNA Topoisomerases
Mex_1p1949
DNA repair and recombination proteins [BR:
mea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Mex_1p1949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ACS39759
UniProt:
C5B1X5
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All DBs
Position
2021027..2022229
Genome browser
AA seq
400 aa
AA seq
DB search
MLSEEVGTGVVDPREAARDAGLRYVDDSKPGLRRKRNGKGFRYIDPKGAPVRDAEEIARL
KSLAIPPAYTEVWICPHPNGHIQATGRDEKGRKQYRYHPRFREAREASKFHRIMAFAEAL
PGIRARIDADMGKRGLPREKVLATVVHLLETTLIRVGNDDYARSNKSYGLTTLRDPHVKV
AGSEMRFRFKGKSGKEWSVSVRDRRVAKIVKACQDLPGQELFQYLDEDGQRRDVTSSDVN
AYLREITGEDFTAKDFRTWAGTVLAALALREFEAFDNAAKAKKNLRAAIESVSSRLGNTP
TICRKCYIHPQILDCYLEGGMLLQVKEAVEGELKNELDVLRPEEAAVLSLLRARLERATK
AASKGTTSESMTKIEPPRQTGGRKARATGTKRTSGGRRAA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcggaggaggtcggaaccggcgtggtcgatccccgcgaggccgcgcgggatgcg
ggcctgcgttacgtggacgattccaagcccggcctgcggcgcaagcgcaacggcaagggc
ttccgctacatcgacccgaagggcgccccggtccgcgacgcggaggagatcgcccggctg
aaaagcctcgcgatcccgccggcctacaccgaggtgtggatctgcccgcacccgaacggt
cacatccaggcgaccgggcgcgacgagaaggggcgcaagcagtaccgctaccatccccgc
ttccgcgaggcgcgcgaggcctcgaagttccaccgcatcatggccttcgccgaggcgctc
ccaggcatccgcgcgcggatcgacgccgatatgggcaagcgcggcctgccccgcgaaaag
gtgctcgccaccgtggtccacctcctggagaccacgctaatccgcgtcggcaacgacgat
tacgcccgctccaacaagagctacggcctcaccaccctgcgcgatccgcatgtgaaggtg
gccggctccgagatgcgcttccgcttcaagggcaagagcggcaaggaatggtcggtctcg
gtgcgcgaccgccgcgtggccaagatcgtcaaggcttgccaggacctgcccggccaggag
ctgttccagtatctcgacgaggatggccagcggcgcgacgtcacctcctcggacgtgaat
gcctacctgcgtgagatcacgggcgaggatttcaccgctaaggatttccgcacctgggcc
ggcacagtgctggcggccctggcgctgcgggagttcgaggcgttcgacaacgcggctaag
gccaagaagaacctgcgcgcggcaatcgagtcggtgtcgtcccggctcggcaacacgccg
accatctgccgcaagtgctacatccacccgcagatcctcgactgctacctcgaaggcggg
atgctgctgcaggtgaaggaggcggtcgagggcgaactcaagaacgaactcgatgtgctg
cgcccggaagaggcggcggtgctgagcctgcttcgggcccgtctggaacgggcgacgaag
gccgcgtctaagggtacgacgagcgaaagcatgacgaagatcgagccgccgcgtcagacc
ggaggccgcaaggcgagggcgaccggcacgaagcgcacgtccgggggcagacgggcggcg
tga
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