Methylorubrum extorquens AM1: Mex_1p2027
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Entry
Mex_1p2027 CDS
T00921
Name
(GenBank) putative ornithine/diaminopimelate PLP-dependent decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
mea
Methylorubrum extorquens AM1
Pathway
mea00330
Arginine and proline metabolism
mea00480
Glutathione metabolism
mea01100
Metabolic pathways
mea01110
Biosynthesis of secondary metabolites
mea04148
Efferocytosis
Module
mea_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
mea00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Mex_1p2027
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Mex_1p2027
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
Mex_1p2027
Enzymes [BR:
mea01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
Mex_1p2027
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
ACS39829
UniProt:
C5B2H4
LinkDB
All DBs
Position
complement(2098997..2100163)
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AA seq
388 aa
AA seq
DB search
MTDRIRDYLRARRDLGQDEGPVMVLDLDVVRDNYTAFARALPDTRVFYAVKANPAAEVLR
LLAEMGSCFDTASVAEIEMALAAGATADRVSFGNTIKKERDVVRALKLGIRLFAVDCQAE
VEKIVRASEAAGIAAGEVQVFCRILCDGAGADWPLSRKFGCEPEMAVNVLEHAHRHGLNA
YGVSFHVGSQQANTEAWDGALASASEIFRECALRGIGLSMVNLGGGFPTKYLKQVPGVET
YGDAIFRALTKHFGNRIPETIIEPGRGMVGNAGLIEAEVVLVSKKSEAEDEVRWVYLDIG
KFGGLAETMDESIRYAIRTDHDEDRMAPCVVAGPTCDSVDVLYEKNHYPLPVSLSIGDKV
WIEGAGAYTTTYAAVAFNGFPPLAQIVI
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcgcatccgcgattacctgcgcgcgcgccgcgacctcggccaggacgagggc
ccggtgatggtcctcgacctcgatgtcgtgcgtgacaactacacggccttcgcccgcgcg
ctgcccgacacccgcgtgttctacgccgtgaaggcgaacccagccgcggaagtgctgcgc
ctgctcgccgagatgggctcctgcttcgacacggcttccgtggccgagatcgagatggcg
ctcgccgccggcgccaccgccgaccgcgtctccttcggcaacaccatcaagaaggagcgc
gacgtcgtccgcgcgctcaagctcggcatccgcctcttcgccgtcgattgccaggccgag
gtcgagaagatcgttcgcgcgagcgaggcggccggcatcgcggccggcgaggtgcaggtg
ttctgccgcatcctgtgcgacggcgccggtgcggattggccgctctcgcgcaagttcggc
tgcgagccggagatggcggtgaacgtgctggagcacgcccaccggcacggcctcaatgcc
tacggcgtctcgttccatgtcggttcgcagcaggccaacacggaagcctgggacggggcg
ctcgcctccgcctccgagatcttccgtgaatgcgctctgcgcggcatcggcctgtcgatg
gtcaatctcggcggcggcttcccgaccaagtacctcaagcaggtgccgggcgtggaaacc
tacggcgacgcgatcttccgtgcgctcaccaagcatttcggcaaccgcatcccggagacg
atcatcgagccgggccgcggcatggtcggcaatgccggcctgatcgaggccgaggtcgtg
ctcgtctccaagaagtcggaggccgaggacgaggtgcgctgggtctatctcgacatcggc
aagttcggtgggctggccgagaccatggacgagtcgatccgctacgcgatccgcaccgac
cacgacgaggaccgcatggcgccctgcgtcgtcgccggcccgacctgcgattcggtcgac
gtgctctacgagaagaaccactacccgctgccggtctccctctcgatcggtgacaaggtg
tggatcgagggcgcgggcgcctacaccacgacctacgcggcggtcgccttcaacggcttc
ccgcccctcgcgcagatcgtgatctga
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