Methylorubrum extorquens AM1: Mex_1p2804
Help
Entry
Mex_1p2804 CDS
T00921
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mea
Methylorubrum extorquens AM1
Pathway
mea03420
Nucleotide excision repair
mea03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mex_1p2804
03430 Mismatch repair
Mex_1p2804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mea03400
]
Mex_1p2804
Enzymes [BR:
mea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mex_1p2804
DNA repair and recombination proteins [BR:
mea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mex_1p2804
MMR (mismatch excision repair)
Other MMR factors
Mex_1p2804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
ACS40557
UniProt:
C5ATN3
LinkDB
All DBs
Position
complement(2921508..2923355)
Genome browser
AA seq
615 aa
AA seq
DB search
MATVRPEDWRPQGIDDLEDRAWTALRETGRSVAITAGAGAGKTEILAQKAAYLLQTGICP
SPRRILAISFKRDAAATLGDRVRLRVPEAQARRFVSLTCDAWTKGMLDQFRRALPALYVP
PSDYGIALPDRDEIRSFLDRVGSRLNRDQFETLLAETAIPLGEQGLDDAVLATLRAYWSQ
QYGAVPGPMLTLPMINRLVEYVLRTNPRIREALRATYPFVFLDEFQDTTSAQFGLVTTAF
DPIGTRVTTVGDVKQRIMGFAGAMPDGFATFRRLFDAREVTLLFNWRSHEELVAVQRVVA
SQIDPATEPVRARRAKSVDGAHCAIWSFPDRTAEIDAIAGWVASELAEGRLEPQRLAILV
RFYANQVEGELRPAFEAHGIRLRNVARSVGGVAIQDLLTEELTILLLPLLRLGTSRHEPG
AWTAALRTVGLVRAIRDDDERRLGHVMRDVEALAVALRRLMTDTPPDPALARDLVAMMLE
GVGEASVRQATAAYHRETDFLRIRSGFTALLGECLAQASSWSDALDRFEGKGQVPLMTIH
KSKGMEFHTMIFFGLDDRSWKGLHRGEAEELNSFFVALTRAEQRAFFTCCTQRGGPIGWL
ETLLGDAVPKVPGGP
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgtgcgtcccgaggactggcggccgcagggcatcgatgacctggaggatcgc
gcctggacggcgttgagggagacggggcgcagcgtcgccatcaccgcgggcgccggcgcc
ggcaagaccgagatcctcgctcagaaggccgcctacctcctccagactggcatctgccca
tccccccgccggatcctggccataagcttcaagagggacgccgcggcgacgctcggcgac
cgagtccgccttagggttcccgaagcgcaggcacgacgcttcgtctcgctgacctgcgat
gcctggacgaaggggatgctcgaccagttcaggcgggcactcccggccctttatgtcccg
ccatccgattacgggatcgcgcttcccgatagggacgagatccggagcttcctcgacagg
gtgggatcacgcctgaaccgggatcagttcgagaccctgctggcggagacggcgatccca
ctgggggagcaggggctcgacgacgccgtcctggcgacgctgcgtgcctactggtcccag
cagtacggggccgttcccggtccgatgctgacgctcccgatgatcaaccggctcgtcgag
tacgtgctgcgtacgaacccacgcatccgggaggcgctccgggcgacctatcccttcgtc
ttcctcgacgagttccaggatacgaccagcgcgcagtttggactcgtcacgaccgccttc
gatccgataggcacgcgcgtcacaacggtgggggacgtcaagcaacgtatcatgggcttc
gcgggcgcgatgccggacggcttcgcgacattcaggcgtcttttcgatgcccgcgaggtg
accctgctcttcaactggagatcgcacgaggaactggttgcggtccaacgcgtggtggcg
agccagatcgacccggccaccgaacccgtccgtgcgaggagggcgaagtcggtcgatggc
gcgcactgcgctatatggtcgtttcccgatcggaccgcggagatcgatgcgatcgcgggg
tgggtggcatccgagttggccgagggacggctcgaaccgcagcgcctcgcgatcctcgtc
cggttctatgccaaccaggtggagggtgagcttcgtcccgccttcgaggcgcatggcatc
cgcctgcgcaacgtcgccaggtcagtcggcggcgtcgcgatccaggatctgttgacggag
gaactgacgatcctcctcctgccgcttctccggctcggcacgagcaggcacgagcccggt
gcctggaccgcggccttgcggacggtgggcttggtacgcgcgatccgcgatgacgacgaa
cgccgcctcggccacgtgatgcgcgacgtcgaggctcttgccgtcgctttgcggcgcctc
atgaccgatacgccgccggatcccgcgctcgctagggacctcgtcgccatgatgctggag
ggtgtcggcgaggcgagcgtccggcaggccacggccgcctaccaccgcgagacggacttc
ctccgtatccggtcaggcttcacagcgctgctgggggaatgcctcgcgcaggcgtcgtca
tggtcggacgcgctcgatcgcttcgagggcaaggggcaggtcccgctcatgaccatccac
aagtcgaagggcatggaattccacacaatgatcttcttcggtctcgacgaccggagctgg
aaggggctccaccggggcgaggccgaggagctgaactcgttcttcgtggccctgacgcgt
gccgaacagcgggccttcttcacctgctgcacccagcgcggcggcccgatcggatggctc
gaaaccctgctcggcgacgcggtgcccaaggtgccgggcggtccttag
DBGET
integrated database retrieval system
