Methylorubrum extorquens AM1: Mex_1p2888
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Entry
Mex_1p2888 CDS
T00921
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B (tRNA pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mea
Methylorubrum extorquens AM1
Brite
KEGG Orthology (KO) [BR:
mea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mea03016
]
Mex_1p2888 (truB)
Enzymes [BR:
mea01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Mex_1p2888 (truB)
Transfer RNA biogenesis [BR:
mea03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Mex_1p2888 (truB)
Prokaryotic type
Mex_1p2888 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ACS40641
UniProt:
C5AUN1
LinkDB
All DBs
Position
complement(3009411..3010295)
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AA seq
294 aa
AA seq
DB search
MSGWVVLDKGVGITSTQAVAVVKRLFNAKKAGHAGTLDPLASGILPIALGEATKTVPFVM
DGRKAYRFEVTWGVETDTDDAEGRPVETSDVRPTLEALEAALPAFVGEIEQVPPRYSAIK
IQGERAYDLARDGEVVELVARSVRIDHLSVIEHHGDRTVIAAECGKGTYVRALARDLGRV
LGCYGHVSALRRTRVGPFEEAAACSVATLEESTEMHLHAVETALDEVPSVAVSRDMGLRL
MRGQPVILRGQDAPIGGKAYATCGGVLVAVGDVERGELVPHRVFHLGGTAAPRN
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggctgggtggtgctcgacaagggcgtcggcatcacctcgacccaggccgtggcg
gtggtgaaacgcctgttcaacgccaagaaggcgggccatgccggcacgctcgatccgctg
gcatcgggcatcctgccgatcgcgctcggcgaggcaacgaagacggtgccgttcgtcatg
gatggccgcaaggcctaccgcttcgaggtgacctggggtgtcgagaccgacaccgatgat
gccgaaggtcgcccggtcgagacctccgacgtccgcccgaccctcgaggcgctcgaggcg
gctctgcccgccttcgtcggcgagatcgaacaggtgccgccgcgctactccgccatcaag
attcagggcgagcgcgcctacgacctcgcccgtgacggcgaggtggtggaactggtggcc
cgctcggtgcgcatcgaccacctctcggtgatcgagcaccacggcgaccgcaccgtgatc
gctgcggaatgcggcaagggcacctacgttcgtgcgctggcccgcgatctcggccgggtg
ctcggctgctacggtcacgtctcggccctgcggcgcacccgcgtcggccccttcgaggag
gcggccgcctgcagcgtcgccaccctcgaagagagcaccgagatgcatctccacgcggtg
gaaacggccctggacgaggtgccctcggtggcggtcagccgcgacatggggcttcgcctg
atgcgcgggcaaccggtgattctgcgcgggcaggacgcgccgatcggcggcaaggcctac
gcgacctgcggcggcgtgctcgtcgccgtcggcgatgtcgagcgcggcgaactggtgccg
catcgcgtgtttcacctcggcggaacggcggcaccgagaaactga
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