Methylorubrum extorquens AM1: Mex_1p2917
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Entry
Mex_1p2917 CDS
T00921
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase (DAP epimerase)
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mea
Methylorubrum extorquens AM1
Pathway
mea00300
Lysine biosynthesis
mea00470
D-Amino acid metabolism
mea01100
Metabolic pathways
mea01110
Biosynthesis of secondary metabolites
mea01120
Microbial metabolism in diverse environments
mea01230
Biosynthesis of amino acids
Module
mea_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mea00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Mex_1p2917 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Mex_1p2917 (dapF)
Enzymes [BR:
mea01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Mex_1p2917 (dapF)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
DUF6140
CntK_N
Motif
Other DBs
NCBI-ProteinID:
ACS40669
UniProt:
C5AUQ9
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All DBs
Position
3046510..3047367
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AA seq
285 aa
AA seq
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MHGAGNAIVVLDLRGTAVRVTPAEARAIAADVHSRFDQLMVVHDPVTPCTDAFMRIYNTD
GSESGACGNGTRCVGYALLDDPAMARPAENGALTLETKAGLVAVKRITERSFTVDMGQPR
LRWDEIPLAEPFLDTRRIELQVGPIDDPILHSPAAVSMGNPHAIFFVERDPDSYDLGRIG
PLLEAHPIFPERANISIAEVTSRDTIKLRVWERGAGLTLACGTAACATVVAASRLRMIGR
TARVALPGGELSIEWRADDHVLMTGPVYLEGEGTFSPDLFAGIDG
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcacggcgccggcaacgccatcgtcgtgctcgacctgcgcggcactgcggtccgtgtg
acgccggccgaggcccgcgccatcgcggccgacgtgcattcgcgcttcgaccagctcatg
gtcgtgcacgatcccgtcacgccctgcaccgatgccttcatgcgcatctacaacactgac
ggctcggaatccggcgcctgcggcaacggcacccgctgcgtcggctacgcgctgctcgac
gatccggccatggcgaggcctgccgagaacggcgccctgacgctggagacgaaggccgga
ctggtcgcggtcaagcggatcaccgagcgctccttcaccgtcgatatgggtcagccgcgc
ctgcgctgggacgaaatcccgctcgccgaaccgtttctcgatacccgccgcatcgagctt
caggtcgggccgatcgacgatccgatcctccattcgcccgccgccgtgagcatgggcaac
ccgcacgcgatcttcttcgtcgagcgcgaccccgacagctacgatctcggccgcatcggg
ccgctgctcgaggcccacccgatcttccccgagcgcgccaacatctccatcgccgaggtg
acgagccgcgacacgatcaagctgcgcgtctgggagcgcggcgcggggctgacgctcgcc
tgcggcacggccgcctgcgccacggtggtggccgcctcgcgcctgcgcatgatcggccgc
accgcccgcgtggcgcttcccggcggggaactctcgatcgagtggcgcgccgacgaccac
gtgctgatgaccggcccggtctatctcgaaggcgagggcacgttctcgcccgacctgttc
gccgggatcgacgggtga
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