Methylorubrum extorquens AM1: Mex_1p2971
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Entry
Mex_1p2971 CDS
T00921
Name
(GenBank) putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL), with PAS sensor, signal transduction histidine kinase and methyl-accepting chemotaxis domains; putative membrane-associated protein
Organism
mea
Methylorubrum extorquens AM1
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_7
HAMP
PAS
PAS_8
4HB_MCP_1
PAS_4
Diguanyl_cycl_sensor
YlxR
Motif
Other DBs
NCBI-ProteinID:
ACS40723
UniProt:
C5AUW3
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Position
3108654..3111518
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AA seq
954 aa
AA seq
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MSLSRRPFGFSLGRTAVGAVLRGGRTIRGRIFLAFLMLSAITAALGGYAAFGIMTTGALV
DKTYDRSLMAINYARAAATDLAMLQAAVARARLAGDSAERRTLEARIEALTQSFEEDLEI
AADRAQSERATREAAAAKDAVAHWLAARREFGPDQQTVDVWQALDAHAAVAEQHIDLLIN
FTAGDGFSYRQTARADVARDVRLSIFATSLAIVLSGIVALLLLRQIVRPVADASTVASRI
AAGELTVRVPEGGDDEFGALLRAMAVMRDNIAAMMQEEVAQRRSAQSLLADAVQGSIEGI
VVVDAGGCIVLANARAAALLGIDQAEPGHRPLSDARGSAVADALLAMPGHATLTAETHTA
DGRWLRISRSPTREGGFVAVCSDVSLLKEQEDQLKRSNAQLDAALSNMLQGLCLYDAEGG
LLVYNRRFCDMFGVDAAALRPGMSIRDVARLVEASSDNGRAIDLLVEQEALLQRGLSASL
CCPIRTDCIVALKQQPTAEGGWIATYEDVTQRYEAEARIITMARKDALTGLANRMVFGER
LEEAAAHLDEGAGAGFATLCLDLDRFKEVNDTLGHPIGDGLLRSVAERLQGCLRDTDLVA
RLGGDEFAIVQAGVQAGTHARRDASALAKRLIAAFQQPFLLDGHTVTVGLSIGISLAPEH
GTSPEKLLKSADLALYRAKATGRGCWAFFDEEMDVELRKRRALESDLKKAVGNGEFELVF
QPIVKLDRQRIASCEALLRWRHPERGYVSPADFIPLAEETGTIGEIGEWVLRKACSEAAT
WPSNIRVAVNVSAAQFKNAAVVRAVMDALAASGLPAHRLELEITESVLLNDSVTTLATLH
TLKRLGVRVAMDDFGTGFSSLSYLQSFPFDKIKIDQSFVRNLAAPGNSRLIVRSVVGLGR
SLGITTTAEGIETEAQLEQLRLEGCDEGQGYLFSRPVPSATIRELVTALGRNAA
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgagcctttcacgccgaccctttggcttttcgctcgggcgcaccgccgtcggggccgtg
ctgcgcggtggtcgcacgattcgcggccgcatcttcctcgccttcctgatgctgagcgcg
atcacagcggcgctcggcggctacgccgccttcggcatcatgacgacgggtgcactggtc
gacaaaacctacgatcgctctctgatggcgatcaattacgcccgggctgccgcgaccgac
ctcgcgatgctccaggctgcggtggcccgagctcgcctggcgggcgatagcgccgagcga
cgcacgcttgaggctcggatcgaggcgctgacgcaatcgttcgaggaagatctggagatc
gccgcggatcgggcccagtcggagcgtgcgacgcgggaggccgccgccgccaaggacgcc
gtcgcccactggctcgccgctcggagggaattcggccccgatcaacagacggtggatgtc
tggcaggcgctcgatgcccacgcggcggtggccgagcagcatatcgacctgctgatcaac
ttcaccgccggggacggcttctcctatcggcagacggcccgcgcggacgtggcccgcgac
gtgcggctcagcatcttcgcgacctcactcgcgatcgttctttcgggcatcgtcgccttg
ctcctgttgcgtcagatcgttcggccggtggccgacgcctcgacggtcgcgagccgcatc
gccgccggtgagttgaccgtgcgcgtacccgagggcggcgacgacgagttcggcgccctg
ctgcgcgccatggcggtcatgcgcgacaacatcgcggcgatgatgcaggaggaggtcgcg
cagcgccgctccgcccaaagcctgctcgccgacgctgtgcaggggtcgatcgaagggatc
gtcgtcgtcgatgccgggggctgcatcgtgctcgcgaacgcgcgggcggccgctttgctc
gggatcgatcaggccgagcccggccatcgcccgctctctgatgcgcgcggttcggccgtc
gccgatgccctgctcgccatgcccggccacgccaccctgaccgccgagacgcacaccgcc
gacgggcgctggctacgcatcagccgcagtcccacacgcgagggcggcttcgttgccgtc
tgcagcgacgtctccctgctgaaggagcaggaggatcagctcaagcgcagcaatgcacag
ctcgacgcggctctcagcaacatgctccaggggctctgcctctacgacgcagagggcggc
ctcctcgtctacaatcgccgcttctgcgacatgttcggtgtcgatgccgccgcgttgcgg
cccggcatgagcatccgcgacgtggcccgtctcgtcgaagcctcgtccgataatggccgc
gcgattgatctcctcgtcgaacaggaggccctgctccaacgcgggttgagcgcctcactg
tgttgcccgatccggacggattgcatcgtcgcgctcaaacagcagccgacggctgaaggt
ggttggatcgccacctacgaggatgtcacccagcgctacgaggcggaagcgcggatcatc
accatggcgcgcaaggacgcgctgacggggctcgccaaccgcatggtgttcggcgagcgc
ctggaagaggccgccgcgcatctcgacgaaggggccggtgccgggttcgccacgctctgc
ctcgatctcgaccggttcaaggaagtcaacgacacgctcggccatcccatcggcgacggg
ttgctgcgcagcgttgcggaacggctacaaggctgcctgcgcgacaccgatctcgtggcg
cgtctcggcggcgacgagttcgccatcgtccaagccggcgtccaggccggcacgcatgcg
cggcgggatgcgagcgccctggccaaacgcctaatcgcggccttccagcagcccttcctg
ctcgacggacacaccgtgacggtcgggctcagcatcggcatctcgctcgcaccggaacac
ggaacgagcccggagaagctgctgaagagcgccgatctcgcgctctaccgcgccaaggcc
accggacggggctgctgggcgttcttcgacgaggagatggacgtcgagctgcgcaagcgc
cgagctctcgaaagcgatctcaagaaggctgtcgggaacggcgagttcgagctcgtgttc
cagccgatcgtcaagctcgaccggcagcggatcgccagttgcgaggcactgctgcgctgg
cgccatcccgagcgcggctatgtctctcccgcggatttcattcccctggcggaggagacg
ggcaccatcggcgaaatcggcgaatgggtgctgcgcaaggcttgcagcgaggccgcgacc
tggccctcgaacatccgcgtcgccgtcaatgtctccgccgcacaattcaagaacgcggcc
gtcgtccgggcggtgatggatgcgctcgccgcgagcgggttgccggcgcaccggctggaa
ctggaaatcaccgagtcggtcctgctcaacgacagcgtgacgacgctggcgacgctccac
accttgaagcgcctcggtgtacgggtcgcgatggacgatttcggcaccggcttctcgtcg
ttgagctacctgcagagcttcccgttcgacaagatcaagatcgaccagtccttcgtgcgt
aaccttgccgcgccgggcaactcgcggctgatcgtgcgctccgtggtcggcctcggccgc
agcctcggcatcacgaccacggcggagggcatcgagaccgaggcgcaactcgagcagctt
cggctcgaaggatgcgacgagggtcagggctacctgttcagccgccccgtcccctcggcc
acgatccgtgaattggtcacggcactcggccgcaacgcggcctga
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