Methylorubrum extorquens AM1: Mex_1p3118
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Entry
Mex_1p3118 CDS
T00921
Name
(GenBank) conserved hypothetical protein, DNA-binding and glycosylase domains; putative DNA glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mea
Methylorubrum extorquens AM1
Pathway
mea03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mex_1p3118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mea03400
]
Mex_1p3118
Enzymes [BR:
mea01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Mex_1p3118
DNA repair and recombination proteins [BR:
mea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Mex_1p3118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
ACS40866
UniProt:
C5AWL1
LinkDB
All DBs
Position
complement(3256015..3256941)
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AA seq
308 aa
AA seq
DB search
MTCTPSPATREDGTRFTLACPQPYDWAHLERFFADHASPGVEAVTPGRYARTFALDGHRG
TLAVTNEADALSVRIRGLGSDDDHENILARVRGMFDLDADPRAIAAGLGRDPFTAALVGR
RPGLRMPGAFDGFELAVRAILGQQVSVAAATRLAGRLVAGFGTPLDAETCGNEPGLTHLF
PTPEQLVDAEISLVLNMPRARGRAIQGLAAAMLATPDLFAPGGELDATVARLKALPGIGD
WTAHYVAMRALVQADAFPAGDVGLMRALDAGDGRPSRLALLDRAVAWRPWRAYAAIHLWA
EDAARRMP
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgcaccccttcgcctgcgacccgagaggacgggacccgcttcacgctggcctgc
ccccagccctacgattgggcgcatctcgaacgcttcttcgccgaccatgcgagccccggc
gtcgaagccgtgacgcccgggcgctatgcccgcaccttcgccctcgacgggcaccgcggc
accctcgccgtcacgaatgaagcggacgctctgtcggtccgtatccgcggcctcggctcg
gacgacgaccacgaaaacatcctcgcgcgggtgcgggggatgttcgatctcgacgccgac
ccgcgggcgatcgccgccggacttggccgcgatccgttcaccgccgccctcgtggggcgc
cggccgggtctgcggatgccgggcgcctttgatgggttcgaactggcggtccgggcgatc
ctcggccagcaggtctcggtcgcggccgcgacgcgtctcgccggccgcctcgttgcgggt
ttcggcacgcccctcgacgcggagacgtgcgggaacgagccgggtctcacccacctgttt
ccgacgccggagcagcttgtggacgccgagatctcgctcgtgctcaacatgccccgcgcc
cgcggccgggcgatccaggggcttgccgcggcaatgctcgccacgccggacttgttcgcg
cccggcggcgaactcgacgcgacggttgcccggctgaaggccctgcccgggatcggggac
tggaccgcgcattacgtcgccatgcgcgctctggtccaagccgacgcctttccggcgggg
gatgtcgggctgatgcgtgccctcgatgccggcgacgggcggccaagccggctggcactt
ctcgaccgtgcggtggcttggcggccctggcgggcctatgccgcgatccatctctgggcc
gaggacgccgcgcggaggatgccatga
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integrated database retrieval system
