Methylorubrum extorquens AM1: Mex_1p3122
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Entry
Mex_1p3122 CDS
T00921
Name
(GenBank) putative penicillin binding protein, beta-lactamase/transpeptidase-like superfamily
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
mea
Methylorubrum extorquens AM1
Pathway
mea00550
Peptidoglycan biosynthesis
mea01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mea00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Mex_1p3122
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mea01002
]
Mex_1p3122
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mea01011
]
Mex_1p3122
Enzymes [BR:
mea01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Mex_1p3122
Peptidases and inhibitors [BR:
mea01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Mex_1p3122
Peptidoglycan biosynthesis and degradation proteins [BR:
mea01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Mex_1p3122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
ACS40870
UniProt:
C5AWL5
LinkDB
All DBs
Position
3259294..3260505
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AA seq
403 aa
AA seq
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MLAAIVSAFLHPAPARAQTFQTAAAHAILIDADSGSVLFEKAADEPFSPASMAKLMTAEI
VFRAIKEGRLSMDTEFTVTEDAWRRGGAGGGGSSMFAQVNSRIKLSDLLRGLIVQSGNDA
AITIAENMAGTEDAFAGMMNQRAKEIGLTRSTFRNATGYSAPDQKVTARDMARIAQYLID
TYPEFYKIYSEREFTWNKIKQQNRNPLLTLDIGADGLKTGYLEESGYALTGSAVQNGQRL
IMVVSGLKTARDRAAEARKMMEWGFRAFEPRQVFAANETVAEVSVFGGEKGSVPVVANKP
VRLLLPRGTSDRVTAKVVYQGPLVAPVAQGREVGRLRVTRGDSLALEQPVYAGETVEAGT
LSQRALDAAMEVGTDLVRRAFEKAKGGNGSGNTSTAGTASGNS
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgctggccgcaatcgtcagtgcgttccttcatccggcgcccgcgcgcgcccagacgttc
cagacggcggccgcgcacgcgatcctgatcgatgccgattccggctcggtgctgttcgag
aaggcggccgacgaaccgttctccccggcgagcatggccaagctgatgacggcggaaatc
gtgttccgcgctatcaaggaggggcgcctctccatggacaccgaattcacggtgaccgag
gacgcatggcgccgcggcggggccggcggcggcggctcctcgatgttcgcgcaggtcaac
agccgcatcaagctctccgacctgctgcgcggcctgatcgtgcagtcgggcaacgacgcg
gcgatcaccatcgccgagaacatggcgggcaccgaggacgccttcgccgggatgatgaac
cagcgcgccaaggagatcgggctgacgcgctcgaccttccgcaacgcgaccggctactcg
gcccccgaccagaaggtgaccgcccgcgacatggcgcggatcgcccaatacctcatcgac
acctaccccgaattctacaagatctattccgagcgtgaattcacctggaacaagatcaaa
cagcagaaccgcaacccactcctgaccctcgatatcggcgccgacggcctgaagaccggc
tacctcgaagagtcgggctacgcgctcaccggttcggcggtgcagaacggccagcggctg
atcatggtggtctcgggcctgaagactgcgcgtgatcgcgcggcggaagcccgcaagatg
atggaatgggggttccgcgccttcgagccgcggcaggtcttcgccgcgaacgagacggtt
gccgaggtctcggtcttcggcggcgagaagggctccgtgccggtggtggccaacaagccg
gtgcgcctgctgctgccgcgcggcacctcggatcgggtgaccgccaaggtggtctaccag
gggccgctcgtcgcccccgtggcgcagggccgcgaggtcggccgcctgcgcgtcacccgc
ggcgacagcctcgccctggagcagccggtttatgccggggagacggtggaggccggcacc
ctgtcgcagcgggccctcgacgcggcgatggaagtcggcacagacctcgtccgccgcgcc
ttcgagaaggccaagggcggcaacggctccggcaacacgtccacggccggcacggccagc
ggcaactcctga
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