Methylorubrum extorquens AM1: Mex_1p3415
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Entry
Mex_1p3415 CDS
T00921
Symbol
miaB
Name
(GenBank) tRNA modification enzyme MiaB, putative isopentenyl-adenosine A37 tRNA methylthiolase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
mea
Methylorubrum extorquens AM1
Brite
KEGG Orthology (KO) [BR:
mea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mea03016
]
Mex_1p3415 (miaB)
Enzymes [BR:
mea01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Mex_1p3415 (miaB)
Transfer RNA biogenesis [BR:
mea03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Mex_1p3415 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
ACS41152
UniProt:
C5AY53
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All DBs
Position
3550844..3552184
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AA seq
446 aa
AA seq
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MKKAYVKSYGCQMNAYDAGRMADVLAAEGYSATDTVEEADVVVLNTCHIREKAAEKVYSE
LGRLRVLKGERAESGHDTRIVVAGCVAQAEGREILSRAPAVDVVVGPQSYHRLPDLLRQS
RETRVVDTEFPAEDKFDHLPARRNRGVTGFLTVQEGCDKFCAFCVVPYTRGAEVSRSVAA
VVDEARRLVEGGVREITLIGQNVNAYHGDGPDGAPATLGHLMDALSAVPGLLRLRYTTSH
PNDFADDLIAAHATNPLVMPYLHLPVQSGSDGILHAMNRRHTGDAYRRLIERIRNARPDI
ALSSDFIVGFPGETDADFAETMRLVSDIGFSAAFSFKYSPRAGTPAAEREDAVPEAVKTE
RLAALQDLLDRQRHAYNAASVGTLTEILVEKTGRHPGQVAGKTPHLQAVQFDAPASTIGT
VVPVRITRAGSNSLFGETLEGAAAAA
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaaagcctacgtcaagtcctacggctgccagatgaacgcctacgacgccggccgc
atggccgacgtcctggccgccgagggctacagcgcgacggacacggtcgaggaggccgat
gtcgtcgtcctcaacacctgccacatccgcgagaaggccgccgagaaggtctattccgaa
ctcgggcgcctgcgtgtgctcaagggcgagcgggccgagagcgggcacgacacccgcatc
gtggtcgcgggctgcgtcgcccaggcggaaggccgcgagattctttcgcgcgcaccggcg
gtcgatgtcgtcgtcggcccgcagagctatcaccgcctgccggacctgctgcgccagtcg
cgcgagacccgcgtcgtggacaccgaattcccggccgaggacaagttcgaccacctgccc
gcccgacgcaaccgcggcgtcaccggcttcctcaccgtgcaggagggctgcgacaagttc
tgcgccttctgcgtcgtgccctatacccgcggcgcggaagtctcgcgctcggtcgcggcg
gtggtggacgaagcgcgccgcctcgtcgagggcggggtgcgcgagatcaccctcatcggc
cagaacgtcaacgcctatcacggcgacgggccggacggcgcacccgcgacgctcggccac
ctgatggacgcgctctccgcggtgccgggcctcctgcgcctgcgctacaccacgagccac
ccgaacgatttcgccgacgatctcattgctgcccatgcgacgaacccgctggtgatgccc
tacctgcacctgccggtgcagtcgggctcggacggcatcctccacgcaatgaaccggcgc
cacacgggtgacgcctaccgccggctgatcgagcgcatccggaatgcgcggcccgacatc
gccctgtcctcggacttcatcgtcggattccccggcgagaccgatgccgatttcgccgag
accatgcggctcgtctccgatatcggcttttcggcggcgttctcgttcaagtacagcccg
cgggccggcacgcccgcagcggaacgcgaggatgcggtgccggaggcggtgaagaccgag
cggctcgccgccctccaagacctcctcgaccgccagcgccacgcctacaacgcggcgagc
gtcggcacgctcaccgagatcctggtcgagaagaccggccggcatcccggtcaggtcgcg
ggcaagacgccgcatctccaggcggtgcagttcgatgcgccggcctcgaccatcggcacg
gtggtgccggtgcggattacgcgtgcgggctccaacagcctgttcggcgaaacgctggag
ggtgcggcggcggccgcgtga
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