Methylorubrum extorquens AM1: Mex_1p4514
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Entry
Mex_1p4514 CDS
T00921
Name
(GenBank) hypothetical protein; putative hemolysin-type calcium-binding repeat domain
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mea
Methylorubrum extorquens AM1
Pathway
mea00040
Pentose and glucuronate interconversions
mea01100
Metabolic pathways
mea02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mea00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Mex_1p4514
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Mex_1p4514
Enzymes [BR:
mea01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Mex_1p4514
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
Beta_helix
NosD
Internalin_N
DUF6383
CBP_BcsO
Motif
Other DBs
NCBI-ProteinID:
ACS42145
UniProt:
C5AQ85
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All DBs
Position
4626343..4627830
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AA seq
495 aa
AA seq
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MPAGQTYSTTPIRTTYDGQVIENLDLWVSDGDAIRVDHDNVVIRNVTIHHADGNGIVVED
VSGVTVQNSLIVNSDPPTGNGGETDAETTGIRVVNASGFTASHVTLQDSGTGIYLGQSPN
AKLSYIEGHNFHGPFPGGQLVQFYQSPNGSLSDFAVTNDASHSHVEDNVSIIDSQNVSIA
NGVIDGNNSPSGAGVMFEGNSQGGHVQNVDVIHMSNGGFSSYSDDVSFVDTRSFDNDAGD
QGRGASLSNGLIWNATGHNVTIDDSTYTDPGVANNIVWGTSSAGADVSAAPSATPMTPIH
NVFDGTATDSTPVAAPVPTPAPTPAPTPAPTPAPTPAPSPAATAPTATAPAGTGIDRDGT
AASETMTGSRFADDLDGRGGNDTLNGLAGDDRLYGGAGNDRLDGGSGTDHLWGGTGADHF
VFKAGNGTDWVEDFQLSGTAQDVVEVSKAMFGSFNALLSAAHDVGSDVAITSGADTLWLA
DVHKAQLSAGDFLFV
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgggccaaacctatagcaccacccccatccgcacgacgtacgacggacaggtt
atcgaaaatctggatctctgggtctccgacggcgacgccatccgcgtcgatcacgacaac
gtcgtcatccgcaacgtcaccatccaccacgccgacggcaacggcatcgtcgtcgaggac
gtcagcggcgtcaccgtccagaacagcctcatcgtcaattccgatccgcccacgggcaac
gggggcgagaccgatgcggagaccaccggcatccgggtcgtcaacgcgtccggcttcacc
gcgtcgcacgtgacgctgcaggacagcggcaccggcatctatctcggccagtccccgaac
gcgaagctctcctacatcgagggccacaacttccacgggccgttccccggcggtcagctc
gttcagttctaccagtcgccgaacggcagcctctcggatttcgctgtcaccaacgatgcg
agccactcgcatgtcgaggacaacgtttcgatcatcgacagccagaacgtctcgatcgcc
aacggcgtgatcgacggcaacaactcgccgagcggtgccggcgtgatgttcgagggtaat
tcgcagggtggccacgtccagaacgtcgacgtgatccacatgagcaatggcggcttctcg
tcctactcggacgacgtgtccttcgtcgacacccgctccttcgacaacgatgccggagat
cagggccgcggcgcgtcgctgtcgaacgggctgatctggaacgcgaccggccacaacgtc
acgatcgacgactcgacctacacggacccaggggtcgccaacaacatcgtctggggaacc
tcctcggccggcgcggacgtgtcggcagcgccctcggccacgccgatgacgccgatccac
aacgtgttcgacgggacggcgaccgacagcacgccggttgcggccccggtgccgacgcct
gccccgactcctgcgccgaccccggccccgaccccggctccgactccggcgccgtccccg
gcggccacggccccgacggccacggccccggccgggacgggcatcgaccgcgacggtacg
gcggcctccgagacgatgaccggctcgcgcttcgctgatgacctcgacgggcggggcggc
aacgacacgctcaacgggctcgccggcgacgaccgcctctacggcggggccggcaacgac
cggctcgacggcggcagcggcaccgaccacctctggggcggcaccggcgcggatcacttc
gtgttcaaggccggcaacggcaccgactgggtcgaggacttccagctcagcggcaccgcg
caggacgtcgttgaagtgagcaaggcgatgttcggttcgttcaatgccctgctctccgcg
gcccatgatgtcggctccgatgtcgccatcacctcgggcgccgacacgctgtggctcgcc
gacgttcacaaggcgcagctctcggccggcgacttcctgttcgtctga
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