Methylorubrum extorquens AM1: Mex_1p4709
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Entry
Mex_1p4709 CDS
T00921
Symbol
rumA
Name
(GenBank) 23S rRNA (Uracil-5-)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
mea
Methylorubrum extorquens AM1
Brite
KEGG Orthology (KO) [BR:
mea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mea03009
]
Mex_1p4709 (rumA)
Enzymes [BR:
mea01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Mex_1p4709 (rumA)
Ribosome biogenesis [BR:
mea03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Mex_1p4709 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
Methyltransf_25
PrmA
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
ACS42337
UniProt:
C5AR64
LinkDB
All DBs
Position
4831998..4833281
Genome browser
AA seq
427 aa
AA seq
DB search
MSDVIEETLTIARLGARGDGLTEGGLAVPGALPGERVRVQRGDRIGTLIAVEEASPDRIA
PFCQYFSACGGCAVQHLAPAPYAEWKRGIVAGALGQARIETTLMPLLDAQGEGRRRITLH
VREIEGRARAGLMAARSHALVPIDHCPITVPSLHRAPAVAEALAAPLGHGRKPLDIAATA
TVTGLDIDIRGHGQVSDGVRGVLTRLAGELDLARLSIHGDVVVERRPPAVGEGPARRVPS
PGSFLQATQAGEATLTALVLEAMDEGKAKVRRVGDLFCGSGPFALTLAAGAREVHAADGE
AAAITALTRAYRAGAGYARITAEARDLFRRPLLGPELDALDAVVFDPPRAGAEAQVRRIA
ESKVPLVVAVACDPGTFARDAATLIAGGYRLERVTPVDQFAWSAHVELVGVFRKQAKVTG
RTLRRPR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgtgatcgaagagactctgaccatcgcccggctcggcgcccgcggcgatggc
ctcaccgagggcgggctggcggtgcccggtgccctgcccggcgagcgcgtacgggtgcag
cgcggcgaccgcatcggcacgctgatcgccgtggaggaggcgtcgccggatcggatcgcg
ccgttctgccagtatttctcggcctgcggcggctgcgccgtgcagcacctcgcccccgcc
ccttacgcggagtggaagcgcggcatcgtcgccggggcgctggggcaggcgcgcatcgag
accacgctgatgccgctcctcgacgcacagggagagggccggcggcggatcaccctgcat
gtgcgcgagatcgagggccgggcgcgggccgggctgatggccgcgcgcagccacgccctg
gtgccgatcgaccattgcccgatcaccgtgccgagcctgcaccgggcgccggccgtcgcg
gaggcgctcgccgccccgctcgggcacggccgcaagccgctcgacatcgccgccaccgcc
accgtaaccggcctcgacatcgacatccgcggccacgggcaggtgagcgacggcgtccgc
ggcgtcctgactcggctcgccggcgaactcgacctcgcccgtttgtcgatccacggcgac
gtggtggtcgagcgccgcccgcccgcggtcggcgagggcccggcccggcgcgtgccctcg
cccggcagcttcctccaggcgacgcaggccggcgaggcgaccctgaccgcgctggtgctg
gaggccatggacgagggcaaggccaaggtaaggcgcgtcggcgacctgttctgcggcagc
ggtcccttcgccctgacgctcgctgcgggggcccgcgaggtccacgccgccgacggcgag
gccgcggcgatcaccgcgctgacccgcgcctaccgagccggagccggctacgcccggatc
acggcggaggcgcgcgacctgttccgccgcccgcttctcgggccggaactcgacgcgctc
gatgcggtggtgttcgacccgccccgcgccggggccgaggcgcaggtgcgccggatcgcg
gaatcgaaggtgcccctcgttgtcgccgtcgcctgcgatcccggcaccttcgcccgcgac
gccgcgaccctgatcgccggcggctaccggctggagcgggtcacgccggtcgatcagttc
gcatggtcggcccatgtcgagctggtcggcgtgttccgcaagcaggcgaaggtcaccggc
cgaacgctgcgtcgcccgcgctga
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