Methylorubrum extorquens AM1: Mex_1p4883
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Entry
Mex_1p4883 CDS
T00921
Name
(GenBank) putative helicase-exonuclease type V protein family
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
mea
Methylorubrum extorquens AM1
Brite
KEGG Orthology (KO) [BR:
mea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mea03400
]
Mex_1p4883
Enzymes [BR:
mea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mex_1p4883
DNA repair and recombination proteins [BR:
mea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Mex_1p4883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
PDDEXK_1
AAA_19
UvrD_C
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACS42492
UniProt:
C5ASM9
LinkDB
All DBs
Position
4996286..4999729
Genome browser
AA seq
1147 aa
AA seq
DB search
MNAPLTGFTVDDLTKAAQRRAADPRLSAWVSANAGAGKTKVLTDRVLRLLLDGAPPGRIL
CLTFTKAAAANMSIRVFQRLGRWVTLDDAALTAELTELTGERPARDTLRLARRLFARAVE
TPGGLKIETLHALCERLLHMFPFEANVPARFVVLDDNQSREAFEIETDNVLADAILGGNQ
ALSDALAVVGAEASGDTLRDAIRSAMRTRALFSDHRALEPALARLPRALALPDGASVETI
EAEILEGSSLGDWREIAGRLRTGKATDEKLADGLVEAHAALGAGKALAPYRSVFFTDKDE
PRAAKSFGTKAVPEDIKQALLDEQARLIPLFDALRAARALARTLGLFRLAAEIHRRVEAQ
KTRLGALDFDDLIHKTLDLLSRVGASWVLYKLDRGVDHVLVDEAQDTNPQQWEILRTLTA
EFAAGEGARGLTRTRFAVGDPKQSIYSFQGADPREFELTRRAWGRAAEGAGHDFADVSLR
LSFRTASHVLAAVDAVFGVPDHFAGLSFDAGAPGTVHASARAGVPGAVELWGIEEPAEAE
EPDAWAAPVDAPEPNAPAIVVARRIARAVKTWTTKGDACGRIWRPGDVLILVRKRSAAFE
EVIRAMKGLGVPVAGQDRLEVAGHIAVLDLVAVGRAGLLPADDLTLATALKTPLVGLTDD
DLTRICARRPFAETLEDALTRHAQAGDGAAIRGLTALRLWIQLAAENGPFGFYAALLGPH
GGRSRLVARLGGEAGDAIDVFLAQAADAENGGDAPCLDAFLADYIVRPGRGRSGLSVKRD
LESGRNEVRVMTVHGAKGLEAPVVVVIDGCEPLGRNDPPLLGLDSTADGPLPPVWTGGRT
QDCAATLAARSALQARAREEHNRLLYVAMTRAADHLVIAPYRGATRETPASWCEMVRIGL
ERGLGDGEAVETDHGPITIWRDGSAASLAAAAADTAPPEPETVPDWLFSAAAPEAEAAPP
LSPSGALGAADGQRQPRRRLGDAEARRRGALVHSLLEHLPRIEPARRAEAADRFARARAP
TLEEAKRKDLVRAVLRLIEAPDLAPLFSDQARAEVALSGRIVVEGIERDVTGRIDRLVVE
DGRVILCDFKTGRPPADDAPLPEREAAQVSLYARLAAAIWPEHAIVALLVWTSGPVVRRV
EGALLGQ
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgccccgttgaccggcttcaccgtcgatgatctgaccaaggcggcacagcgccgg
gccgccgacccgcgcctctcggcctgggtctcggccaatgccggcgcgggcaagaccaag
gtgctcaccgaccgggtgctgcgcctgctcctcgacggcgcgccgcccggccgcatcctc
tgcctcaccttcaccaaggcggcggctgccaatatgtcgatccgcgtgttccagcgcctc
ggccgctgggtgacgctggacgacgcggcgctgaccgcggaactcaccgaactcaccggc
gagcggcccgcccgcgacaccttgcggctggcccgccgcctgttcgcccgcgccgtcgag
acgccgggcggcctcaagatcgagacgctgcacgctctgtgcgagcggctgctgcacatg
ttcccgttcgaggccaacgtgccggcccgcttcgtcgtgctcgacgacaaccagtcgcgc
gaggcgttcgagatcgagaccgacaacgtgctcgccgacgcgatcctcggcggcaaccaa
gcgctgtccgacgcgctcgccgtggtcggcgcggaagcctccggcgacaccctgcgcgac
gcgatccgctcggccatgcggacgcgggcgctgttctccgaccaccgcgccctggagccg
gcgctcgcccgcctgccccgcgccctggcgctgccggacggcgccagcgtcgagaccatc
gaggcggagatcctggaggggagcagcctcggcgattggcgcgagatcgcgggccggctg
cgcaccggcaaggcgacggacgagaaactcgccgacgggctcgtggaggcgcatgccgcc
ctcggcgcgggcaaggcgctggcgccctaccgctcggtcttcttcaccgacaaggatgag
ccgcgcgcggccaaatccttcggcaccaaggcggtaccggaggacatcaagcaggcgctg
ctcgatgagcaggcccggctgatcccgctcttcgacgcgctacgcgccgcccgcgcgctc
gcccggacgctgggcctgtttcggctcgccgccgagatccaccgccgggtcgaggcgcag
aagacgcgtctcggcgccctcgatttcgacgacctgatccacaagaccctcgacctgctc
tcgcgggtcggcgcctcctgggtcctgtacaagctcgaccgcggcgtcgatcacgtcctc
gtcgatgaggcgcaggacaccaacccgcagcaatgggagatcctgcgcacgctcaccgcc
gagttcgcggcgggcgaaggcgcgcgcggcctcacccgcacccgcttcgccgtgggcgat
ccgaagcagtcgatctacagcttccagggcgccgacccgcgggaattcgagctgacccgc
cgcgcctggggccgggcggcggagggcgccgggcacgacttcgccgatgtcagcctgcgg
ctctccttccgcaccgcgagccatgtgctcgccgcggtcgatgccgtgttcggcgtgccg
gatcatttcgccggcctctccttcgatgcgggcgcgccgggcaccgtccacgcctccgcc
cgcgccggcgtgcccggcgcggtcgaactctggggcatcgaggagccggcggaagccgag
gagcccgatgcctgggccgccccggtcgatgcgccggagcccaacgcgccggccatcgtg
gtcgcccgccgcatcgcccgcgcggtgaagacttggacgacgaagggcgatgcctgcggc
cggatctggcggcccggcgatgtgctgatcctcgtgcgcaagcgctcggccgcgttcgag
gaggtgatccgggcgatgaaggggctcggcgtgccggtggcgggccaggaccggctcgag
gttgcgggccacatcgccgtgctcgatctcgtcgcggtcggccgcgccgggctgctgccc
gccgacgacctgacgctcgccaccgccctcaagaccccgctcgtcggcctcaccgacgac
gacctcacccgcatctgcgcccgccgccccttcgccgagacgctggaagacgcactgacc
cgccacgcgcaggccggtgacggggcggcgatccgcggccttacggccctgcggctctgg
atccaactcgcggcggagaacggcccgttcggcttctacgccgccctgctcgggccccat
ggcgggcgcagccggctggtggcgcggctcggcggcgaggcgggcgatgccatcgacgtg
ttcctggcccaggccgccgacgccgagaacgggggcgacgccccctgcctcgacgccttc
ctcgccgattacatcgtccgaccgggccgcggccgaagtggtctctcggtcaagcgcgat
ctggaatcgggccgcaacgaggtgcgggtgatgacggttcacggcgccaagggcttggag
gcgccggtcgtcgtcgtcatcgacggctgcgagccgctcggccgcaacgacccgccgctg
ctcggcctcgactccaccgccgacgggccgctgccgccggtctggaccggcgggcgcacg
caggattgcgcggcgacgctggccgcccgctccgctctccaggcgcgggcgcgggaagag
cataaccgcctgctctacgtcgccatgacccgggccgccgaccacctcgtcatcgcgccc
tatcgcggcgcgacccgggagacgccggcctcgtggtgcgagatggtccgcatcggcctg
gagcgggggctgggggacggcgaagcggtcgagaccgatcacgggccgatcacgatctgg
cgcgacggttcggccgcctcgctcgccgccgccgcagcggacacggccccgccggagccc
gaaaccgtgccggactggctgttctcggctgccgcacccgaggccgaggccgcgccgccg
ctcagtccctcgggcgcgctcggcgctgcggacgggcagcgccagccccgtcggcgcctc
ggcgatgccgaggcccgccgccgcggcgccctggtccactcgcttctcgaacacctgccg
cggatcgagccggcccggcgggccgaagccgccgaccgcttcgcccgtgcccgcgcgccc
actctggaggaggccaagcgcaaggatctcgtccgcgcggttctgcggctgatcgaggcg
ccggacctcgcgccgctgttctcagaccaggcccgcgccgaggtcgcgctctcggggcgg
atcgtcgtcgaggggatcgagcgcgacgtcaccggccggatcgaccggctcgtcgtcgag
gacggccgggtgatcctctgcgacttcaagaccggccgcccgcccgcggacgatgcgccg
ctgccggagcgcgaggcggctcaggtcagcctctacgcgcggctcgccgccgcgatctgg
cccgagcacgcgatcgtggcgctgctggtctggacctcgggcccggtggtgcggcgggtg
gagggggctctgctcggacaatga
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