Methylorubrum extorquens AM1: Mex_1p5084
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Entry
Mex_1p5084 CDS
T00921
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
mea
Methylorubrum extorquens AM1
Pathway
mea00470
D-Amino acid metabolism
mea00550
Peptidoglycan biosynthesis
mea01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mea00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Mex_1p5084 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Mex_1p5084 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mea01011
]
Mex_1p5084 (murD)
Enzymes [BR:
mea01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Mex_1p5084 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
mea01011
]
Precursor biosynthesis
Amino acid ligase
Mex_1p5084 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
ACS42688
UniProt:
C5ATY9
LinkDB
All DBs
Position
complement(5235995..5237362)
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AA seq
455 aa
AA seq
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MTPATTFAGQKLALFGLGGSGLVTVRSLLAGGADVLAWDDNAGSRDRAREQGITVTDLNE
ADWSGFSALVLAPGVPLTHPEPHWTVGLARQAGIPVIGDIEIFCRERAALAPNAPFVAIT
GTNGKSTTTALTAHLLRHAGRDVQMGGNIGTAILSLEPPAATCVHVVELSSFQIDLTPSL
KPGVGILLNLTPDHLDRHGTMENYAAIKERLVAGADLAVIGVDDPYCAAIAERRTGERIR
LHVEGHGDAAGDYVGANGTVRGPDGAVIAEVTGIQALLGDHNLQNAAAAVAAAIRLGLTS
AEIAAGLKSFPGLAHRMEPLRRIGPTLFVNDSKATNADSTEKALLAFRDIHWIVGGKAKE
GGIEPLAPLFDRVAHAYLIGASSEAFAATLEGRVAFTRCGTLEAATEAAARAARASGTEA
PVVLLSPACASYDQFPNFEVRGDRFRTLVAALPDA
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgacgccagccaccaccttcgccggccagaaactcgccctgttcggcctcggcgggtcc
gggctcgtcaccgtccgttcgctgctggccggcggcgccgacgtgctagcctgggacgac
aacgcgggcagccgcgaccgcgcccgcgagcagggcatcaccgtcaccgatctcaacgag
gccgactggtcgggcttctcggccctggtgctggcgcccggcgtgcccctgacacatccc
gagccgcactggaccgtgggactggcgcggcaggccggcatcccggtcatcggcgacatc
gagattttctgccgcgagcgcgcggccttggcacccaacgcaccgttcgtggccatcacc
ggcaccaacgggaaatccaccaccacggcgctcaccgcccacctgctgcgccatgccggg
cgcgacgtgcagatgggcggcaatatcggcaccgcgatcctgtcgctggagccgcccgcg
gctacctgcgtccacgtggtcgaactgtcctcgttccagatcgacctgacgccctcgctc
aaacccggcgtcggcatcctgctcaacctgacgccggaccatctcgaccgtcacggcacc
atggagaactacgccgcgatcaaggagcggctggtggcgggcgcggatctcgccgtgatc
ggcgtcgatgacccctactgcgcagcgatcgccgagcgccgcacgggcgagcgcatccgc
ctccatgttgaggggcacggcgacgcagcgggcgactatgtcggcgccaacggtacggtg
cgcgggcctgacggcgccgtgatcgccgaggtcaccggcatccaggcgctgctcggcgac
cacaacctccagaacgccgccgccgcggtcgccgccgcgatccggctcggtctcacgagc
gcggagatcgcggcggggctgaagagctttcccggcctcgcccaccggatggagccgctg
cgccggatcggcccgacgctgttcgtcaacgattccaaggcgaccaacgccgattcgacc
gagaaggcgctgctggccttccgagacatccattggatcgtcggcggcaaggcgaaggag
ggcggcatcgagccgttggcgccgctgttcgaccgcgtcgcccacgcctacctgatcggt
gcgtcgagcgaggccttcgccgcgacgctggaaggacgcgtcgccttcacccgctgcggc
acgctggaggccgcgaccgaggcggcggcgcgggccgcccgcgcatccggtaccgaggcg
cccgtcgtgctgctgtcgccggcctgcgcctcctacgaccagttcccgaacttcgaggtc
cgcggcgaccgctttcggaccctggtcgccgcgctgccggacgcctga
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