Methylorubrum extorquens AM1: Mex_1p5086
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Entry
Mex_1p5086 CDS
T00921
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
mea
Methylorubrum extorquens AM1
Pathway
mea00300
Lysine biosynthesis
mea00550
Peptidoglycan biosynthesis
mea01100
Metabolic pathways
mea01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
mea00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Mex_1p5086 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Mex_1p5086 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Mex_1p5086 (murF)
Enzymes [BR:
mea01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
Mex_1p5086 (murF)
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GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ACS42690
UniProt:
C5ATZ1
LinkDB
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Position
complement(5238574..5240037)
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AA seq
487 aa
AA seq
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MSDAPLWTPAALEAATGGRLIGAPRAVTGASIDTRSLEPGDLFFAIRGEARDGHDFVRAA
LEKGAGAAVVAEARAKEFEGAGPVLAVPGEGDDPVLDAMRRLGLAARARTGAAIVAVTGS
VGKTGTKEALRHVLSAQGATHASVASYNNHWGVPLTLTRMLEDTRFGVFEIGMNHGAEIL
PLTAMVRPDVALITTVEPVHIEHFRSLSAIADAKGEIFSGLKPGGVAVINRDNPNYERLL
AHAQASRAGRVITFGEHAAADVCAHRILTRPDVSVVDATVMGVPVTYQLGTPGRHVAMNS
LGVLACIHALGADLARAALSLASLKPPVGRGERTALRIGDGEAFLVDESYNANPASIRAA
LSTLAGIDTGAKGRRIAVLGDMKELGAAGEALHRELADAVAANGIDLVFAVGPLMAHLFE
ALPMPVRGTAAPTAEGVTDAVLATLRSGDAVMVKGSNSMRMVRIVEAVKARYAVAPDPRE
ASLNAVR
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgcccccctctggacccccgccgccctggaagcggccaccggcgggcgcctg
atcggcgcgccgcgtgccgtcaccggcgcctcgatcgacacccgcagcctggaacccggc
gacctgttcttcgccatccgcggcgaggcgcgcgacgggcacgacttcgtgcgcgccgcc
ctggagaagggcgccggcgcggcggtggtcgcggaagcccgtgcgaaggaattcgagggc
gccggcccggtgctggccgtgccgggtgagggcgacgatccggttctagacgcgatgcgt
cgtctcggtctggccgcgcgcgcccgcaccggggcggcgatcgtcgcggtgaccggctcc
gtcggcaagaccggtaccaaggaagccctgcgccacgtgctctcggcgcaaggcgccacg
cacgcctcggtcgcctcctacaacaaccattggggcgtgccgctgacgctgacgcggatg
ctggaagacacccgcttcggcgtgttcgagatcggcatgaaccacggcgccgagatcctg
ccgctgaccgcgatggtgcggccggacgtggcgctgatcaccacggttgagccggtgcat
atcgagcatttccgttcgctctcggccatcgccgacgccaagggcgagattttttccggg
ctcaagcccggcggcgtcgcggtgatcaaccgcgacaacccgaactacgagcgcctgctc
gcccacgcgcaggcctcgcgggcggggcgcgtcatcaccttcggcgagcacgcggcggcg
gatgtgtgcgcccaccgcatcctgacccgccccgacgtgtcggtggtcgatgccaccgtg
atgggcgttcccgtgacctaccagctcggcacgccgggccggcacgtcgcaatgaactcg
ctcggcgtgctcgcctgcatccacgcgctcggcgccgacctcgcccgcgccgccctgtcg
ctggcaagcctcaagccgccggtcgggcgcggcgagcgcacggcgcttcggatcggggac
ggcgaggccttcctcgtcgacgagagctacaacgccaaccccgcctcgatccgcgcggcg
ctgtcgacgcttgccggcatcgacaccggcgccaagggccggcgcatcgccgtgctcggc
gacatgaaggagctcggcgcggcgggtgaagcgctgcaccgcgaactggcggacgcggtc
gccgcgaacggcatcgacctcgtcttcgccgtcggcccgctgatggcgcacctgttcgag
gcgctgccgatgccggtgcgggggacggccgcgccgaccgccgagggagtcaccgatgcc
gtcctcgcgaccctgcggtcgggcgatgccgtgatggtcaagggctccaactccatgcgc
atggtccgcattgtcgaagcggtgaaagcccgctacgcggtcgcgccggacccgcgcgaa
gcctcgctgaacgcggttcgctaa
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