Methylorubrum extorquens AM1: Mex_2p0511
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Entry
Mex_2p0511 CDS
T00921
Name
(GenBank) putative Helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mea
Methylorubrum extorquens AM1
Pathway
mea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Mex_2p0511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mea03400
]
Mex_2p0511
Enzymes [BR:
mea01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Mex_2p0511
DNA repair and recombination proteins [BR:
mea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Mex_2p0511
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
UvrD_C_2
AAA_11
AAA_28
MeaB
AAA_16
UvrD-helicase
nSTAND3
NAT10_TcmA_helicase
Viral_helicase1
AAA_22
AAA_29
NPHP3_N
Mg_chelatase
PIF1
NTPase_1
TrwB_AAD_bind
AAA_18
AAA_5
SLFN-g3_helicase
AAA
TsaE
DEAD
Motif
Other DBs
NCBI-ProteinID:
ACS43358
UniProt:
C5B4H6
LinkDB
All DBs
Position
megaplasmid:complement(470501..473095)
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AA seq
864 aa
AA seq
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MDTIAGIVTHVRKKPEEGGSGLYVVRYETAGGMVEAKASSRALALEVGDWFLAKGEWRPN
VFRGRTEHIFNAVSVKPDLPATREGAAVFLSRIFEAGRHGATPASIRAFVDRHGAAACRK
AEQNPEILAEISSDPARFRGAILADWARRLSNRRAVVAMSKAGVDDHAIGRILEAYKDDT
WKVLRENPYVVSRVPDVGFPNADKLGVDMGIPAGDDRRIESAVLAVLDRARGEGSTGLPA
AKAAEEAAALLGRDGGMRAQVENWLLAAAGRRDGPVRVDRSPKGFVVHLPELLVAEAYVA
RRIMDMLRAPPVHTPARVDAAMERVFAANPKFARFDAVQREAVRSAALSQVFILTGGPGT
GKTTVTEALIAVLEELGHRQIDLVAPTGKAAKRASAATKRKALTLHRRLLAREDKKTGGS
MFGVNRENPLPAGTVLLVDETSMIDAQTMAAVVDALPPDGRLVLIGDPHQLPSVGAGNVL
ADLLSARTGSRPLVPSVGLVNIYRQEETSSIARESRTVKDGKVPFMDNKVRGGLAFYEHD
ASDIAEEIVRLVTGPMRAQLGLDPARDVAVMSPQAPGPAGTWELNARLSAALNPGGRAIE
GVFHGPRDDPKMPLPRVGDRVMATKNDEENDVFNGDVGTVAGVEDRNADGRQKRVIKVAF
DPDAPGARPRLVEYPVTRWRELILAYACTIHKMQGSQATAAVIVASSAHAGMLDRTILYT
GWTRPEELLFVVGERSALEDAVSRRASDLRWTRLAEFVERAAHECGFAPAQREPAPARPA
PAAPAPVQSRSAVPPRVVPGGVRPAGGGLPPRVMVPPQPGGPAPVGQAEVEAPGQARAAR
PAVPRIVLPRPKAPVPSLGPRPGG
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggacaccatcgccggcatcgtcacgcacgtccgcaagaagcccgaggagggcggcagc
ggcctatacgtcgtccgctacgagaccgccggcggcatggtcgaggctaaggcctcgtcg
cgcgcgctcgcgctcgaggtcggcgactggttcctggcgaagggcgagtggcgccccaac
gtcttccgcggccggaccgagcacatcttcaacgccgtctcggtgaagccggatctgccc
gccacccgcgagggcgcggcggtcttcctgtcccgcatcttcgaggcgggccgccacggc
gcgacgccggcctcgatccgggcgttcgtcgaccggcacggggccgcggcctgccgcaag
gccgagcagaatcccgaaatcctcgcggagatctcgtccgatccggcccgcttccggggg
gcgatcctggcggactgggcgcgccgcctctccaaccgccgcgccgtggtcgcgatgtcc
aaggcgggcgtcgacgaccacgcgatcggccgcatcctcgaggcatacaaggacgacacc
tggaaggtgctgcgcgagaacccctacgtggtgtcgcgggtgccggacgtgggctttccg
aacgcggacaagctcggcgtcgacatgggcatccccgccggcgacgaccgccgcatcgag
tccgccgtcctggccgttctcgaccgggcccggggcgagggatcgacgggcctgcctgcc
gccaaggcggcggaggaggccgcggcgctgctcggccgcgacggcggaatgcgcgcgcag
gtggagaactggctcctagccgccgccggccgccgggacggcccggtccgcgtcgaccgg
tcccctaagggcttcgtcgtccatctccccgagctgctcgtggccgaggcatacgtcgcc
cgccggatcatggacatgctccgcgcgcctcccgtgcacacgccggcgcgggtcgacgcc
gcgatggagcgcgtgttcgccgcaaacccgaagttcgcgcgcttcgacgccgtgcagcgg
gaagcggtgcgcagcgcggccctgtcccaggtcttcatcctcacgggcggtcccggcacc
ggcaagacgacggtcactgaggcgctcatcgccgtcctggaggagctgggacaccggcag
atcgacctcgtcgcgccgaccggcaaggcggccaagcgcgcctcggccgccacgaagcgc
aaggccctgaccctgcacaggcggcttctcgcccgcgaggacaagaagaccggcggcagc
atgttcggggtcaaccgcgagaacccgctgcccgcgggcaccgtgctgctcgtcgacgag
acctccatgatcgacgcgcagaccatggcggcggtggtcgacgcgctcccgcccgacggc
cgcctcgtcctgatcggcgacccccaccagctgccctcggtcggggccgggaacgtgctg
gccgatctgctgtccgcgcggaccggcagccgcccgctcgtgccctcggtcggcctcgtg
aacatctaccgtcaggaggagacctccagcatcgcccgcgagtcccggaccgtgaaggac
gggaaggtgccgttcatggacaacaaggtccgcggcgggcttgccttctacgagcacgac
gcctccgacatcgccgaggagatcgtccgcttggttacgggcccgatgcgggcgcagctc
ggcctcgatcccgcgcgcgacgtcgcggtgatgagcccgcaggctccggggccggcgggc
acctgggagctcaacgcgcggctgtcggcggcgctcaaccccggcggccgcgcgatcgag
ggcgtcttccacggtccgcgcgacgatccgaagatgccgctgccgcgggtcggcgaccgg
gtgatggcgaccaagaacgacgaggagaacgacgtcttcaacggcgacgtcggcacggtc
gcgggcgtcgaggacagaaacgcggacggacgccagaagcgggtgatcaaggtcgccttc
gatcccgacgcgcccggcgcgcggcccaggctcgtcgagtatccggtgacccgctggcgc
gagctgatcctcgcctacgcctgcaccatccacaagatgcaggggtcacaggcgaccgcg
gcggtgatcgtcgcctccagcgcccacgccggaatgctcgaccggacgatcctgtacacc
ggctggacgcgccccgaggagctgctgttcgtcgtcggcgagcggagcgccctcgaggac
gccgtctcccgcagggcctccgacctgcgctggacgcggctcgccgagttcgtggagcgc
gccgcgcacgagtgcggcttcgcacccgcccagcgggagcccgcgcccgcgcgtccggca
cccgccgctcccgcacccgtccagtcccggtccgcggtcccgcccagagtggttccggga
ggcgtcaggccggcgggcggcggacttcctccccgcgtcatggttccgccccagcccggc
ggccccgctccggtcggtcaggcggaagtcgaggcgcccgggcaggcacgtgcggcgcgt
cccgccgttcctcgcattgtcctgccgcgcccgaaggctccggttccttcgctcggaccc
cgtcccggcggctga
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