Methylorubrum extorquens AM1: Mex_2p0726
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Entry
Mex_2p0726 CDS
T00921
Name
(GenBank) putative DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mea
Methylorubrum extorquens AM1
Pathway
mea03420
Nucleotide excision repair
mea03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mex_2p0726
03430 Mismatch repair
Mex_2p0726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mea03400
]
Mex_2p0726
Enzymes [BR:
mea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mex_2p0726
DNA repair and recombination proteins [BR:
mea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mex_2p0726
MMR (mismatch excision repair)
Other MMR factors
Mex_2p0726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
AAA_11
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ACS43570
UniProt:
C5B538
LinkDB
All DBs
Position
megaplasmid:complement(678623..680746)
Genome browser
AA seq
707 aa
AA seq
DB search
MDLISLLRSPLDDLDPEQRAAAAAVSGGHVVIAGAGTGKTRTLTARIAHLVRERGVDPSS
IVGTTFTNKAAREIRERVGAVTGDAAAALRLGTFHSLGARILRRHASAAGFQDRSFVVLP
QSEAAELLQRIVEEQRLVRAVPLPDCDPALSDEDWERLSAAADGDRRRETAAFVREAARA
IARWKSWGLTAPMVADPSRGRRDQGQEAFAATYLAYQRALEARNMADFGDLVLKALVLLE
DDPRVSRAEAGSVAHLLVDEAQDANAVQVRFARALAASAESVFAVGDENQNIMAFQGAYP
GAMQAIAGPGATLHVLTRNRRCTDEILRPANEVVRWNRGSRRGALVSGRSGPAPQVVAYD
SEVAEAHGIAKAAKQLIADGTDPSKIAVLVRSAWVLKPYEEAFLRAKVPFAVVGGRNALD
REEAKDVVAFLRLATSPRDDLAFRRIANKPARGLGQAVVEAVVGHVSASGRTFHEACLAV
AEAGHLEPRACEGLEILAEGLRLLYARAAGTKPDGLVEIAVTRTGYEEHLDRSEGDRKER
RATVAMLRRSARDAEDLTEFLETLALMSDLEFEGLREGARVKISTIHAAKGLEFDEVFLP
CWESGVFPNPRAVDEGVRGRPGDPWNGPIGGGVDEERRLAHVALTRARHGVHVSYATARI
GFGAFLGAGPSALLAEADLELTAAPNGDLRPAKATRSSRMPAARGRR
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtggatctcatctcgctccttcgttcaccgctcgacgacctcgatcccgagcagcgtgca
gccgcggccgcggtctccggcggccacgtcgtgatcgccggagcgggcacgggcaagaca
cggaccctgacggcgcggatcgcccacctcgtgcgcgagcgcggcgtcgatccttcgtcg
atcgtcggcacgaccttcaccaacaaggccgcgcgcgaaatccgcgaacgcgtcggcgcc
gtgacgggcgacgcggcggccgccctgcggctcggcaccttccactcgcttggcgcgcgc
atcctgcgccggcacgcctccgccgccgggttccaggaccgttccttcgtggtgctgccc
cagtccgaggccgccgagctcctgcagcgcatcgtcgaggagcagcgcctcgtgcgcgcc
gtgccgctgcccgactgcgatccggctctgtccgacgaggactgggagcgcctctcggcg
gcggccgacggcgacagacggcgcgagaccgcggcgttcgtccgcgaggccgcccgggcg
atcgcgcgctggaagtcgtgggggctgaccgctccgatggtggccgatccctcccgggga
cggcgcgaccagggccaggaggccttcgcggcgacctatctcgcctaccagcgtgctctt
gaggcgcgcaacatggccgacttcggcgacctcgtcctgaaggcgctcgtcctgctggag
gatgatccccgggtctcccgggccgaggcgggctcggtcgcgcatctcctcgtcgacgag
gcgcaggacgccaacgccgtgcaggtccgcttcgcgcgggcgctcgcagcctccgcggaa
agcgtcttcgcggtcggtgacgagaaccagaacatcatggcgttccagggcgcctatccg
ggagccatgcaggccatcgccggtccgggagcgacgctccacgtgctgacgcgcaaccgc
cgctgcaccgacgagatcctgcggccggccaacgaggtcgtgcgctggaaccgcggctcc
cggcgaggcgcgctcgtgtcgggccgcagcggccccgcgccccaggtcgtggcctacgac
tccgaggtggccgaggcgcacgggatcgccaaggccgcgaagcagctgatcgccgacggt
accgatccctcgaagatcgccgtgctcgtgcggagcgcctgggtgctcaagccctacgag
gaggcgttcctccgcgcgaaggtccccttcgccgtggtcggcggccgcaacgcgctcgac
cgcgaggaggccaaggacgtcgtcgcctttctgcgcctcgcgacgagtccccgcgacgac
ctcgccttccggcgcatcgcgaacaagccggcccgcggactcggacaggccgtcgtcgag
gccgtcgtgggccacgtgtccgcctccggcaggaccttccacgaggcctgcctcgccgtc
gccgaggcggggcatctggagccccgggcctgcgagggcctcgagatcctggccgagggg
ctgcgcctcctctacgcccgggcggccggcacgaagcccgacgggctcgtggagatcgcg
gtgacgcgcaccggctacgaggagcatctcgaccgcagcgagggcgacaggaaggaacgg
cgcgccacggtggcgatgctgcggcgctccgcccgcgatgcggaagatctgacggagttc
ctggagaccctggccctgatgtcggacctcgagttcgagggcctgcgcgagggcgcccgc
gtgaagatctcgacgatccacgccgccaaggggctcgaattcgacgaggtcttcctgccc
tgctgggagtcgggcgtgttccccaacccccgcgcggtcgacgagggcgtgcggggccgg
ccgggcgacccctggaacggaccgatcggcggcggcgtcgacgaggagcgccgtctcgcc
cacgtcgcgctcacgcgtgcccggcacggggtccacgtctcctacgcgacggctcgcatc
gggttcggcgcctttctgggcgcgggcccctcggcgctgctcgcggaagccgacctcgag
ctcacggccgcgccgaacggcgacctcaggcccgccaaggccacgcggagttcgcgcatg
ccggcggcccgcggccggcgctga
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integrated database retrieval system
