Methylorubrum extorquens AM1: Mex_2p0727
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Entry
Mex_2p0727 CDS
T00921
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mea
Methylorubrum extorquens AM1
Pathway
mea03030
DNA replication
mea03430
Mismatch repair
mea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mex_2p0727
03430 Mismatch repair
Mex_2p0727
03440 Homologous recombination
Mex_2p0727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mea03032
]
Mex_2p0727
03400 DNA repair and recombination proteins [BR:
mea03400
]
Mex_2p0727
Enzymes [BR:
mea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mex_2p0727
DNA replication proteins [BR:
mea03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Mex_2p0727
DNA repair and recombination proteins [BR:
mea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Mex_2p0727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
Motif
Other DBs
NCBI-ProteinID:
ACS43571
UniProt:
C5B539
LinkDB
All DBs
Position
megaplasmid:680912..684862
Genome browser
AA seq
1316 aa
AA seq
DB search
MTDRPFVHLNVLSDFSFSHGTRGVSGVKELVARAAALGQPALALTDDMNMFGVYKFSSAA
AEKGVQPIVGTKIWVRAGATNVFGTMQLLASSETGYVNLCRLLKVALFPDAEGRISAHKD
RSYVQLGHLLNAEYSQDVVCLSGGKDGFMSRVWDAARQNAQGAADWLSWVEDPGGLAAVF
GDRFFFEICRNGVETDEDFAREAWLLDTAARQGRPVVATTQVLYAAEERHDALEILSAVA
RKENGSITVGPGTLRARVEARYHMRSDAEMRELFADLPTAYDNALEVARCTAFKVAKRKP
RLPRFDAAGRSEREELVHQARTGLEERFGELGTSEEARQEYRDRLEFELGVIGKMGFDGY
FLIVSDFIKWALAHDVPVGPGRGSGAGSLVAYALRITNLDPLRFGLLFERFLNPDRVSMP
DFDIDFCIQGRASVVQYVRERYGSDLVSQIASFGEIKSKTAIKDAGRVLTHERDGSYGYS
ETDGMTKLVPMVQGNPYTLKRAYDEIPDLRQFVDASEKTRVLFDNARKIEGLLRQRGVHA
AGILIGDVPLEELLPVTWNATDGMPLAQFDLKGAEDVGLVKFDFLGLETLSVLKLARQYV
KDSRGVDLDFDKIPLDDAGVYEIFARGMTNAIFQFESGGMKRALREMKPTRIEDLIAANA
LYRPGPMEMIPVYNDCKNGRQEPDYPEPREKTKPILEETFGIMVYQEQVMAVARAVAGLT
LGQADLLRRAMGKKIKAEMDAQKAGFVKGALEHGTSARTAEELFDKIAKFAEYGFNKSHS
AAYALIAYHTGWLKKHYPQEFYAAVLSFEAAKNNVHEMSLVKEDLDAFGIPLLPPDVNRS
TGQFAPERTEQGGAIRFGLVGIKGLSGGIDAMVAEREANGPFRTVADFGRRTAGLFNRSQ
IENLAAVGAFVGLPIVAGGPPETNRAKAAIAAQFFANGAKREAKSTDQFGLFAAEETARE
ELPEEMHSTAEWPDIPDREFRAVGFYFDQHPLKMLRPRMAKADLENEDVRVGTRGSVYEI
MTARRESETRAVVVAMIENVRKTTTERGPRLDVEASDTTGNYRFYVYPNRRGQVRTLDEM
YAVLEAARGSRQPAAVLGRMVWQPDDPRLHVDDVQAAKDYLAPYATDVRIDLDPRRIRLG
MAEMGELRALQQTTSEARARLERAEPGSQEAQIRARDVADAEAAVEARRRSLMDVAESAR
FDQILGLVEKMKLPPHAREGVRIDLFWTQDGQKQKLALDGRFALTTARRKDLEAVDIVEQ
VREYLREDVKTQAPAGAATRRQAASLAPPAVQAARPRVRTPSAPPPRIVFAAPAMR
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacagaccgttcgtccacctcaacgtcctcagcgacttctcgttctcgcacggc
acgcgcggcgtcagcggcgtgaaggagctggtcgcgcgcgccgctgccctcgggcagccc
gcgctcgcgctgaccgacgacatgaacatgttcggggtctacaagttctcctcggccgcg
gccgagaagggcgtgcagccgatcgtcgggacgaagatctgggtccgtgccggcgccacg
aacgtctttggcaccatgcagctgctcgcctcctcggagacgggctacgtcaacctctgc
cgcctcctcaaggtggcgctgttcccggacgccgagggccggatctcggcgcacaaggac
cgctcctacgtccagctcgggcacctcctcaacgccgagtactcccaggacgtcgtctgc
ctgtccggcggcaaggacggcttcatgtcccgcgtctgggacgccgcgcgccagaacgca
cagggcgccgccgactggctctcctgggtggaggatccgggcggcctcgccgccgtcttc
ggcgaccgcttcttcttcgagatctgccgcaacggcgtcgagaccgacgaggatttcgcc
cgcgaggcgtggctcctcgacaccgccgcccgccagggccgccctgtcgtggccacgacc
caggtgctctacgcggccgaggaacggcacgacgcgctggagatcctctccgcggtcgcc
cgcaaggagaacggctccatcaccgtcgggcccggcacgctccgggcgcgggtggaggcg
cgctaccacatgcgcagcgacgccgagatgcgcgagctcttcgccgacctgccgacggcc
tacgacaacgccctcgaggtcgcgcgctgcacggccttcaaggtcgccaagcgcaagccg
cgcctgccgcgcttcgacgccgccggccgcagcgagcgggaagagctcgtgcaccaagcc
cgcacgggtctggaggagcgcttcggcgaactcggcacctcggaggaggcgaggcaggag
taccgcgaccggctcgagttcgagctcggcgtgatcgggaagatgggcttcgacggctac
ttcctgatcgtctccgacttcatcaagtgggcgctcgcccacgacgtgccggtaggcccc
ggccgcggctcgggcgcgggctcgctggtcgcctatgcgttgcggatcacgaacctcgat
ccgctccgcttcggcctgctgttcgagcgcttcctgaacccggaccgcgtctcgatgccg
gacttcgacatcgacttctgcatccagggacgtgcctccgtcgtccagtacgtgcgcgag
cgctacggcagcgacctcgtcagccagatcgcgtccttcggcgagatcaagtccaagacg
gcgatcaaggacgccggccgggtgctcacgcacgagcgcgacgggagctacggctactcg
gagaccgacgggatgacgaagctcgtcccgatggtccagggcaatccctacacgctgaag
cgcgcctacgacgagatcccggacctgcgccagttcgtcgacgcctccgagaagacgcgc
gtgctgttcgacaacgcgcgcaagatcgagggcctcctgcgccagcgcggcgtccacgcc
gccggcatcctgatcggcgacgtgcccctggaggagctgctcccggtcacctggaatgcg
accgacggcatgccgctcgcccagttcgacctcaagggcgcggaggacgtcggactcgtt
aagttcgacttcctcggcctcgagacgctctcggtcctgaagctcgcccgccagtatgtg
aaggactcccgcggcgtcgacctcgacttcgacaagatccctctcgacgacgcgggcgtc
tacgagatcttcgcgcgcggcatgacgaacgcgatcttccagttcgagagcggcggcatg
aagcgcgcgctccgggagatgaagccgacccgcatcgaggatctgatcgccgccaacgcc
ctctaccggcccggtccgatggagatgatcccggtctacaacgactgcaagaacggacgg
caggagcccgactacccggaaccgcgcgagaagacgaagccgatcctggaggagaccttc
ggcatcatggtctaccaggagcaggtgatggccgtcgcccgcgccgtcgcgggcctgacg
ctcggccaggccgacctgctgcgccgcgccatgggcaagaagatcaaggcggagatggat
gcccagaaggcgggcttcgtgaagggcgcgctggagcacggcacctcggcccgcaccgca
gaggagctcttcgacaagatcgcgaagtttgccgagtacggcttcaacaagagccactcg
gcggcctacgccctgatcgcctatcacaccggctggctgaagaagcactacccgcaggaa
ttctacgccgcggtgctctccttcgaggccgccaagaacaacgtccacgagatgtcgctg
gtcaaggaggacctcgacgccttcgggatcccgctgctgccgcccgacgtgaaccgctcg
acgggccagttcgcccccgagcggaccgagcagggcggcgccatccgcttcggcctcgtc
ggcatcaagggcctgtcgggcggcatcgacgccatggtcgccgagcgggaggccaacggc
ccgttccggacggtcgccgacttcggccgccgcaccgccggcctgttcaaccgcagccag
atcgagaacctagcggcggtgggcgccttcgtgggcctgccgatcgtcgcgggcggacct
cccgagacgaaccgcgccaaggccgcgatcgccgcgcagttcttcgccaacggcgccaag
cgcgaggcgaagtccaccgatcagttcggcctgttcgccgccgaggagacggcccgcgag
gagctgccggaggagatgcactccacggccgagtggcccgacatcccggaccgcgagttc
cgcgccgtcggcttctacttcgaccagcacccgctcaagatgctgcggccccgcatggcc
aaggccgacctggagaacgaggacgtccgggtgggcacccgcggctcggtctacgagatc
atgacggcgcgccgcgagagcgagacgcgcgcggtggtcgtggcgatgatcgagaacgtg
cgcaagacgacgacggagcggggcccccgcctcgacgtcgaggcgtccgacacgacgggc
aactaccgcttctacgtctaccccaaccggcgcggccaggtccgcacgttggacgagatg
tacgcggtcctggaggcggcccgcgggtcgcgccagcccgcggcggtgctcggccgcatg
gtgtggcagcccgacgatccgcgactccacgtggacgacgtgcaggccgccaaggactac
ctcgctccctacgccaccgacgtgcgcatcgacctggatccgcgccgcatccgtctgggc
atggccgagatgggcgaactgcgggccctgcagcagaccacgtccgaggcccgggcccgc
ctcgagcgggccgagcccggcagccaggaggcgcagatccgggcccgcgacgtcgccgac
gcggaggccgccgtggaggcgcgccggcgctcgctcatggacgtcgccgagagcgcccgc
ttcgaccagatcctcggcctcgtcgagaagatgaagcttccaccccatgccagggaggga
gtgcgcatcgacctgttctggacccaggacggacagaagcagaagctcgccctcgacggg
cgcttcgcgctcaccacggcccgcaggaaggacctcgaggccgtcgatatcgtcgagcag
gtcagggaatacctgcgggaggacgtgaagacccaggccccggccggcgccgcgacacgg
cgtcaggccgcgtcgctcgcgccccctgccgtccaggcggcccgaccccgggtccggacg
ccctccgcgccgccgccgcgcatcgtttttgccgctcccgccatgcggtga
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