Methylorubrum extorquens AM1: Mex_2p1102
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Entry
Mex_2p1102 CDS
T00921
Name
(GenBank) putative helicase (ATP-dependent exodeoxyribonuclease, subunit A)
Organism
mea
Methylorubrum extorquens AM1
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
ACS43879
UniProt:
C5B5Z7
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Position
megaplasmid:1034627..1037977
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AA seq
1116 aa
AA seq
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MTAHDRTLTDAAQRALAIAAHERSMIVEAGAGSGKTALMSGRIALMLASGVAPGAIAAVS
FTELAASELLERVGDVVARLLDGEVPEELRLALPHGLSPLQGANLAEAEARLDELVCTTI
HGFCQRLVKPYPVEADIDPGARVADEAEADGIFRDLLDEWLRECLSGGGSLVAEMVLADP
VAAKDAVDRVAECLREGRTVGTRPAEPLHRSTEAFLGRVSALADFVRACPVAEPETASAL
LAFQAMAERVRHLNGNDDATVVSLLTSEPELSLCTKDGGFASYRGGKGKWAAAAKAVGIP
KVEADLFHEAAKALHGACCDTWESMRANAASELLVRLVVQVRVVLHRYQDRKRAGALLDF
DDLIASAATLLRDHEEVRQALGRRYRHVLVDEFQDTDPLQAEILWLLCGELPADAAGAAW
TDRVLRPGALFLVGDPKQAIYRFRGADVSTYVQARDCIRAKSPEDVISVSTNFRSCRSIL
AFVDNRFREVLQVEGQPGYVALDPFHEDHDRGPCVAALDIPAAEGDGKRSADALRDAEAE
AVADLCARLIGQRLVTCSRNGTRILQAGDIALLAPSGSDLWRYEEALEARGIPVSTQAGK
GFFRRQEIQDLIALTRVLADPRDTLALGALLRGPAVGLTDEELLDLVDGLPRDPERPDAR
QKLRLGLDVAHVAHPVAREVIGRLQVLARRALGTTPHDILSQAVDAIRLRPVVRQRHDGH
AERALANVDLFLEMSRPYAVRGLRAFARAMKAAWDGRTRTVEGRPDAQEAAVSLFTMHAS
KGLEWPVVIPINTSTRTKAVSGALVDRPANCLYCPVFGVRPAGYEDALDRERREVVNERV
RLWYVAATRARETLVLPRFPEPSDRTSWASVIALGLDAVPAIDLGRLPLRPMVAVTETLN
EQTREVFTSEAATVARHRRLTWIVPSRDDAPVPGFEDAGSEPLPVPTETVSAPPQGGRER
GTVIHKLLEEILTGELDERDGLEARARFLAGHLGPCEADGRPAALDPADIAACVARALAL
PQVAGIRERLRAEVPVYAYEALDEEERATAGVADALACDERGQPDVVVDWKSDVAPGKDA
LLGYRAQVARYLAATGARLGLIVFVTDGTVVSVTPA
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgcacgacaggaccctaaccgacgccgcccagcgggccctcgccatcgccgcg
cacgagcggtcgatgatcgtggaggccggggccggctccggcaagacggccctgatgtcg
ggccggatcgccctgatgctcgcctccggcgtagcgcccggggcaatcgcggccgtcagc
ttcaccgaactcgccgcgagcgaactccttgaacgggtcggcgacgtcgtcgcccgcttg
ctcgatggcgaggtccccgaggagttgaggctcgcgctcccgcacggattgtcgccgctc
cagggtgcgaatctggccgaggcggaggcccggctcgacgagctggtctgcacgaccatc
cacggcttctgccagcgcctcgtgaagccttacccggtcgaggcggacatcgacccgggg
gcccgggtggccgacgaggcggaagccgacggcatcttccgcgacctcctcgacgagtgg
ttgcgggaatgtctctcgggcggtggcagccttgtcgccgagatggtgctggcggacccg
gtcgcggcgaaggacgcggtcgaccgggtggccgagtgcctgcgcgagggacgtacggtt
gggactcgtcccgctgagcccctgcaccgctcgacggaggctttcctcggacgggtgtcc
gcgctcgccgacttcgtccgagcctgccccgtcgccgagccggagaccgcgtcggccctg
ctggcgttccaggccatggccgagcgcgtccgccacctcaacggcaacgacgacgccacg
gtcgtctccctgctgacgtccgagcctgagctgagcctgtgcaccaaggacggcgggttt
gcgagctatcgtggcgggaagggcaagtgggcggccgccgccaaggccgtcgggattccg
aaggtcgaggcggacctgttccacgaggcggccaaggccttgcacggcgcctgttgcgac
acgtgggagagcatgcgggcgaacgctgccagcgagctccttgtcaggttggtcgtgcag
gtccgcgtggtcctccaccgttaccaggaccggaagcgcgcgggcgccctgctcgacttc
gacgacctgatcgcctcggcggccacgctcctgcgggaccacgaggaggtgcggcaggcg
ctcggcaggcggtaccgccacgtccttgtcgacgagttccaggacacggacccgctgcaa
gcggagatcctctggctcctatgcggtgagttgcccgccgacgcggccggcgcggcctgg
accgaccgcgtgctgcggcctggcgcgctcttcctcgtcggcgacccgaagcaggcgatc
taccgcttccggggcgcggacgtgtcgacctacgtgcaggcgcgcgactgcatccgcgcc
aagtcgccggaggacgtgatctccgtctcgacgaacttccggtcctgccgctcgatcctc
gccttcgtggacaaccgcttccgcgaggtgctgcaggtggaggggcaaccgggctacgtc
gccctcgacccgttccacgaggaccacgaccggggtccctgcgtcgccgccctcgacatc
ccggcggcggagggggacgggaagcgcagcgccgacgcccttcgcgacgccgaggcggaa
gccgtcgcggatctatgcgcacgcctgatcggccagcgtctcgtgacctgcagccgcaac
gggacccggatcctccaggccggcgacatcgcgctcctcgcgccgagcggcagcgacctg
tggcgttacgaggaagccctggaagccaggggcatcccagtgtcgacccaggcggggaag
gggttcttccgcaggcaggagatccaggacctgatcgccctgacgcgggtcctggccgac
cctcgcgacaccctggccctcggggcgctcctgcgcggcccggcggtgggcctcactgac
gaggaactgctcgacctggtcgacggcctgccgcgcgaccccgagcgccccgacgcgcgg
cagaagctgcggctcggcctcgacgtcgcgcacgtcgcccacccggtcgcgcgggaggtc
atcgggcgcctgcaggtcctggcgaggcgggcgctcggcacgacgccgcacgacatcctg
agccaggcggtggacgcgatccggcttcggcccgtcgtccggcaacggcacgacggccac
gccgagcgcgcgctggcgaacgtcgacctcttcctagagatgtcgcgcccctacgccgtg
cgcggcctgcgcgccttcgccagggcgatgaaggcggcctgggacgggcgaacgcgcacg
gtcgaggggaggcccgacgcccaagaggcggcggtctccctgttcacgatgcacgcgtcc
aagggccttgagtggcccgtggtgatcccgatcaacacttcgaccaggacgaaggccgtg
agcggagccctcgtcgaccggccggcgaactgcctgtactgcccggtcttcggggtccgc
ccagccgggtacgaggacgccttggaccgcgaacgccgcgaggttgtcaacgagcgcgtg
cggctctggtacgtcgcggccacgcgggcccgcgagaccctcgtgctgccgcgcttccct
gagccgtccgaccggacctcctgggcgtcggtgatcgccctcggcctcgacgccgtcccc
gccatcgatctgggacggcttccgctccggccgatggtggccgtgacggagacgctcaac
gagcagacgcgcgaggttttcacctcggaggcggcgacggtcgcgcgccatcggcggcta
acgtggatcgtgccgagccgggacgacgccccggtgccgggcttcgaagacgccggctcc
gagccgctgcccgttccgaccgaaacggtatcggcgcctccgcaaggcggccgggagcga
ggcacggtcatccacaagctcttggaggagatcctcaccggggagcttgatgagcgtgac
gggctggaggcccgcgcccgtttcctcgcggggcacctgggtccgtgcgaggcggacggc
cggcctgccgcactcgatcccgccgacatcgcggcctgcgtcgcgagggcgctcgccctc
ccgcaggtcgcgggcatccgcgaacgcctccgcgcggaggtgccggtctacgcttacgag
gcactcgacgaggaggagcgggcgaccgcgggcgtggccgatgcactggcctgcgacgag
cgcggacagccggatgtggtcgttgactggaagagcgacgtcgccccggggaaggatgcg
ctcctgggctatcgcgcgcaggtcgcgcgctacctcgccgcgaccggcgcgcgtctgggc
ctgatcgtgttcgtgaccgacgggaccgtcgtctccgtcacgccggcctga
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